KEGG   Rhodopseudomonas palustris BisB5: RPD_0479
Entry
RPD_0479          CDS       T00345                                 
Name
(GenBank) succinate dehydrogenase subunit A
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
rpd  Rhodopseudomonas palustris BisB5
Pathway
rpd00020  Citrate cycle (TCA cycle)
rpd00190  Oxidative phosphorylation
rpd00650  Butanoate metabolism
rpd01100  Metabolic pathways
rpd01110  Biosynthesis of secondary metabolites
rpd01120  Microbial metabolism in diverse environments
rpd01200  Carbon metabolism
Module
rpd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rpd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpd_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    RPD_0479
   00650 Butanoate metabolism
    RPD_0479
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    RPD_0479
Enzymes [BR:rpd01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     RPD_0479
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 GIDA DAO Thi4 HI0933_like
Other DBs
NCBI-ProteinID: ABE37717
UniProt: Q13DX2
Position
complement(553099..554922)
AA seq 607 aa
MAANGNGAPAVNGHAYPIEDHVYDVVVVGAGGAGLRAVVGCSEAGLRTACITKVFPTRSH
TVAAQGGISAALGNMHKDDWRWHMYDTVKGSDWLGDQDSIEYMVRNAPEAVYELEHWGVP
FSRTEEGKIYQRPFGGMTMEFGKGQAQRTCAAADRTGHAMLHTMYGQALRHAAEFYIEFF
AIDLIMDDQGCCRGVIALKLDDGTLHRFRAQTTILATGGYGRAYASCTSAHTCTGDGGAM
ALRAGLPLQDMEFVQFHPTGIYGSGCLVTEGARGEGGYLVNSEGERFMERYAPSAKDLAS
RDVVSRAMTIEMREGRGVGKKKDHIFLHLDHLAPEVLAERLPGISESARIFAGVDVTREP
IPILPTVHYNMGGIPTNFRGEVVTKKEGDDNAVVPGLMAIGEAACVSVHGANRLGSNSLI
DLVVFGRAAALRCAEKLTINGKQPELPADSADGTLSRLDKYRYASGGTPTAKLRESMQQV
MQNNCAVFRTGEVLSEGKDLIRKVHGGVGDIGVSDRSLVWNSDLVETLEFDNLIIQAVVT
MNSAANRTESRGAHAREDFPDRDDKQWMKHTLAWIGDDGDTTIDYRPVHDYTMTNDVQYI
PPKPRVY
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggcggcgaacggcaacggcgcaccggccgtgaacggccacgcctatccgatcgaagac
cacgtctatgatgtcgtcgtggtcggcgccggcggcgcaggtttgcgcgcggtggtgggc
tgcagtgaggcggggcttcgcaccgcctgcatcaccaaggtgtttccgacccgctcccac
accgtggcggcgcagggcggcatctcggccgcgctcggcaacatgcacaaggacgactgg
cgctggcacatgtacgacaccgtgaaggggtcggactggctcggcgaccaggattcgatc
gaatacatggtgcgcaacgcgcccgaggcggtctacgagctcgaacattggggcgtgccg
ttctcgcgcaccgaagaaggcaagatctatcagcgcccgttcggcggcatgaccatggaa
ttcggcaagggccaggcgcagcgcacctgcgccgccgccgaccgcaccggccatgcgatg
ctgcacacgatgtacggccaggcgctgcgccacgccgccgaattctacatcgagttcttc
gcgatcgacctgatcatggacgatcaaggctgttgccgcggcgtgatcgccctgaaactc
gacgacggcacgctgcatcgtttccgcgcccagaccaccattctggccaccggcggctac
ggccgcgcctacgcctcctgcacctcggcgcacacctgcaccggcgacggcggcgcgatg
gcgctgcgcgccggtctgccgctgcaggacatggagttcgtccagttccacccgaccggg
atctatggttcgggctgcctcgtcaccgagggcgcccgcggcgagggcggctatctggtc
aattccgaaggcgagcgcttcatggagcgctacgcgccgtccgccaaggatctcgcctcg
cgcgacgtggtgtcgcgcgcgatgacgatcgaaatgcgcgagggccgcggcgtcggcaag
aagaaagaccacatcttcctgcatctcgaccatctcgcgccggaagtgctggcggagcgg
ctgccgggcatctcggaatcggcgcggatcttcgccggcgtcgacgtcacccgcgagccg
atcccgatcctgccgaccgtgcactacaacatgggcggcatcccgaccaatttccgcggt
gaggtcgtcaccaagaaggaaggcgacgacaacgccgtggtgccgggcctgatggcgatc
ggcgaggccgcctgcgtctccgttcacggcgccaaccgcctcggctccaactcgctgatc
gacctcgtggtgttcggccgcgccgcggcgctgcgctgcgccgagaagctgacgatcaac
ggcaagcagccggagcttccggcggattccgccgatggcacgctgtcgcggctcgacaaa
tatcgctacgcctcgggcggcaccccgaccgccaagctgcgcgagagcatgcagcaggtg
atgcagaacaactgcgcggtgttccgcaccggcgaggtgctgagcgagggcaaggacctg
atccgcaaggtgcatggcggcgtcggcgatatcggcgtgtccgaccgctcgctggtgtgg
aattccgacctggtcgagacgctggaattcgacaatctgatcatccaggcggtggtgacg
atgaactcggccgccaaccgcaccgagagccgcggcgcccatgcgcgcgaggacttcccg
gatcgcgacgacaagcagtggatgaagcacacgctggcctggatcggcgacgacggcgac
accacgatcgattatcgcccggttcacgactacacgatgaccaacgacgtccagtacatc
ccgccgaagccgcgggtgtattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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