KEGG   Rhodopseudomonas palustris BisB5: RPD_0561
Entry
RPD_0561          CDS       T00345                                 
Name
(GenBank) NUDIX hydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rpd  Rhodopseudomonas palustris BisB5
Pathway
rpd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RPD_0561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpd03019]
    RPD_0561
Messenger RNA biogenesis [BR:rpd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     RPD_0561
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: ABE37799
UniProt: Q13DP0
Position
complement(634798..635307)
AA seq 169 aa
MSETPPARSLPYRRNVGIALFNAEGRVLIGRRFRDDGPEIILPGLEWQMPQGGIDADEEP
RDAVMRELWEETGVRHAEILGETDWVTYDFPPYDGPPHRLGVFCGQRQKWFALRFTGDEA
EIDPLAVRNDMPPEFDAWRWEQLDRVADLVVPFRRDVYREVARSFARFV
NT seq 510 nt   +upstreamnt  +downstreamnt
gtgagcgaaacgccgcctgcgcgatcgctgccctaccggcgcaatgtcggcatcgcgctg
ttcaatgccgaaggccgggtgctgatcggccgccgcttccgcgatgacggtcccgagatc
atcctgccgggcctcgaatggcagatgccgcaaggcggcatcgacgccgacgaggagccg
cgggacgcggtgatgcgtgagctgtgggaagagaccggcgtccggcacgccgagattctc
ggcgagaccgattgggtcacctacgatttcccgccttatgacggcccgccgcaccggctc
ggggtgttttgcggtcagcgccagaaatggttcgcgctgcgcttcaccggcgatgaagcc
gagatcgatccgttggcggtgcgcaacgacatgccgccggaattcgacgcctggcgctgg
gagcagctcgaccgcgtcgccgacctcgtcgtcccgttccgccgcgacgtctatcgcgaa
gtcgcgcggagctttgcgcggttcgtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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