KEGG R.palustris_BisB5: RPD

Rhodopseudomonas palustris BisB5: RPD_1018

Entry

RPD_1018 CDS R.palustris_BisB5

Definition homogentisate 1,2-dioxygenase (EC:1.13.11.5)

Orthology K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5]

Pathway rpd00350 Tyrosine metabolism
rpd00643 Styrene degradation
rpd01100 Metabolic pathways

Class Metabolism; Amino Acid Metabolism; Tyrosine metabolism
[PATH:rpd00350]
Metabolism; Xenobiotics Biodegradation and Metabolism; Styrene
degradation [PATH:rpd00643]

SSDB

Motif Pfam: HgmA

Other DBs NCBI-GI: 91975498
NCBI-GeneID: 4021493
JGI: RPD1018
UniProt: Q13CD3

Position 1156630..1157976

AA seq 448 aa
MNVNAAPEIVGRASQGVTPGYMSGFGNSFETEALPGALPVGRNSPQRAAYGLYAEQLSGS
PFTAPRGANERSWLYRIRPSVKHSGRFAKADMGLWRSAPCLEHDMPIAQLRWDAPPMPTE
EVTFVQGVRTMTTAGDVNTQAGMAAHMYLISRSMVDQHFYNADGELMFVPQQGRLRLVTE
FGVIAIEPAEIAVIPRGVKFRVELVDGPARGYLCENYGGAFTLPERGPIGANCLANSRDF
LTPVASYEDKDTPTELFVKWGGALWRTSLPHSPIDVVAWHGNYAPYKYDLRTFSPVGAIG
FDHPDPSIFTVLTSPSETAGTANIDFVIFPERWMVAENTFRPPWYHMNIMSEFMGLIYGV
YDAKPQGFAPGGASLHNMMLPHGPDREAFDHASNGELKPVKLTGTMAFMLETRYPQRVTE
YAATADTLQDDYADCWRGLEKRFDPSRP

NT seq 1347 nt +upstreamnt +downstreamnt
atgaacgtcaacgccgcgcctgagatcgtcggccgtgcttcgcagggcgtcacgccgggc
tacatgtccggcttcggcaattcgttcgagaccgaggcgctgcccggcgcgttgccggtc
ggccgcaattcgccgcagcgtgcggcctatgggctctatgccgagcagttgtccggctcg
cccttcaccgcgccgcgcggcgccaatgagcgctcgtggctgtatcgcatccgaccgtcg
gtgaagcattccggccggttcgcgaaagccgatatggggttgtggcgctcggcgccttgc
ctcgaacacgacatgccgatcgctcagctccggtgggatgcgccgccgatgccgaccgag
gaggtgaccttcgtgcagggcgtgcggacgatgaccacggccggcgatgtgaacacccaa
gccggcatggccgcgcatatgtacctgatcagccggtcgatggtcgatcagcatttctac
aatgccgatggcgagctgatgttcgtgccgcagcaaggtcgattgcggctcgtcaccgaa
ttcggcgtgatcgcgatcgagccggccgagatcgcggtgatcccgcgcggcgtcaagttc
cgcgtcgagctggtcgatggtccggcgcgcggttatctctgcgagaattacggcggcgcg
ttcaccctgccggagcgcggcccgatcggcgccaattgcctcgccaattcgcgcgatttc
ctgacgccggtcgcatcctacgaggacaaggacacgccgaccgagctgttcgtgaaatgg
ggcggggcgctgtggcggacgagtttgccgcattcgccgatcgacgtggtcgcctggcac
ggcaactacgcgccgtataaatacgatctgcgaacgttctcgccggtcggcgcgatcggc
ttcgaccatcccgatccgtcgatcttcaccgtgctgacctcgccgtcggagaccgcgggc
acggcgaatatcgacttcgtgatctttcccgagcgctggatggtggcggaaaacaccttc
cgcccgccctggtatcacatgaacatcatgtcggagttcatggggctgatctacggcgtc
tatgacgccaagccgcagggcttcgctccgggcggcgcgagcctgcacaacatgatgctg
ccgcacgggccggatcgcgaagcgttcgatcatgcgtcgaacggcgagctgaaaccggtc
aagctcaccggcacgatggccttcatgctggagacccgctatccgcagcgcgtcaccgaa
tacgcggcgaccgccgacaccttgcaggatgactacgccgattgctggcgcggcctcgag
aagcgcttcgatccgagccggccatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-RPD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)

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