KEGG T00345: RPD

Rhodopseudomonas palustris BisB5: RPD_1751

Entry

RPD_1751 CDS T00345

Definition

tryptophan synthase subunit beta (EC:4.2.1.20)

Orthology

K06001

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

rpd Rhodopseudomonas palustris BisB5

Pathway

rpd00260	Glycine, serine and threonine metabolism
rpd00400	Phenylalanine, tyrosine and tryptophan biosynthesis
rpd01100	Metabolic pathways
rpd01110	Biosynthesis of secondary metabolites
rpd01230	Biosynthesis of amino acids

Module

rpd_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rpd00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rpd00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1966240..1967604

AA seq 454 aa
MSDQIKYVLDEENIPKSWYNLNADFPKPMPPVLHPGTHQPVGPSDLEPLFPMELILQEVA
TDRYIDIPAPVRDVFRMWRPSPLVRARRLEQALGTPAKIYYKYEGVSPAGSHKPNTAVPQ
AWYNKQAGIKKLSTETGAGQWGSSLAFAGSLFGLDVLVFQVRISYDQKPYRRALMETYGA
RCIASPSNETESGRSILAQTPDSPGSLGIAISEAVEVAAKNPDIKYALGSVLNHVMLHQT
IIGEEAIKQCEMAGDDPDVIIGCAGGGSNFAGLAFPFIGLQLRGGRRRRIIAVEPAACPS
LTRGKYAYDFGDTSHLTPLMKMHTLGSTFMPPGFHAGGLRYHGMGAMVSHAYELGLIEAR
AYHQVKCFEAGVQFARNEGIVPAPESTHAVRCAIDEALRCKEEGKSETILFNLSGHGHFD
MQSYINYFEGKLVDIDYDEAALATALAGLPAVAA

NT seq 1365 nt +upstreamnt +downstreamnt
atgagcgaccagatcaaatacgtcctggacgaggagaacattccgaagtcctggtacaat
ttgaacgccgattttccgaagccgatgccccccgtgctgcatccgggcacgcaccagccg
gtcggcccgagcgatctggagccgctgtttccgatggagctgatcctccaggaggtcgcg
accgatcgctacattgatattccggcgccggtccgcgacgtgttccggatgtggcggccg
tcgccgctggtgcgcgcgcgcaggctggagcaggcgctcggcacaccggccaagatctac
tacaaatatgaaggcgtctcgccggccggttcgcacaagccgaacaccgcggtgccgcag
gcctggtacaacaagcaggccggcatcaagaagctgtcgaccgaaaccggcgccgggcag
tggggctcgtcgctggccttcgccggctcgctgttcgggctcgacgtgctggtgttccag
gtccgcatttcctacgaccagaagccgtatcgccgcgcgctgatggaaacctatggcgcg
cgctgcatcgcctcgccgtcgaacgagaccgagtccggccgctccatcctcgcccagacc
cccgacagccccggttcgctcggcatcgcgatctccgaagcggtcgaagtcgcggcgaag
aatccggacattaaatacgcgctcggttcggtgctcaatcatgtcatgctgcaccagacc
atcatcggcgaagaagcgatcaagcagtgcgagatggcgggcgacgatcccgacgtcatc
atcggctgcgccggcggcggctcgaatttcgctggcctcgcgttcccgttcatcggcctg
caactgcgcggcggacgcaggcggcgcatcatcgcggtggagccggcggcctgcccgtcg
ctgacccgcggcaaatacgcctacgacttcggcgacacctcgcatctcacgccgctgatg
aagatgcacacgctcggctcgaccttcatgccgccgggcttccatgcaggcggcctgcgc
tatcacggcatgggcgcgatggtgtcgcacgcctacgagctcggtctgatcgaggcgcgc
gcctatcatcaggtgaagtgcttcgaggccggcgtgcaattcgcgcgcaatgaaggcatc
gtgcccgcgcccgaatccacccacgcggtgcgctgcgcgatcgacgaagcgctgcgctgc
aaggaagagggcaagtcggagacgatcctgttcaatctctccggccacggccatttcgac
atgcagtcctacatcaactacttcgagggcaagctggtcgacatcgactacgacgaagcc
gctctggcaaccgcgctggccgggcttccggccgtcgcggcctga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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