KEGG T00345: RPD

Rhodopseudomonas palustris BisB5: RPD_1876

Entry

RPD_1876 CDS T00345

Definition

phosphoenolpyruvate carboxylase (EC:4.1.1.31)

Orthology

K01595

phosphoenolpyruvate carboxylase [EC:4.1.1.31]

Organism

rpd Rhodopseudomonas palustris BisB5

Pathway

rpd00620	Pyruvate metabolism
rpd00680	Methane metabolism
rpd00710	Carbon fixation in photosynthetic organisms
rpd01100	Metabolic pathways
rpd01120	Microbial metabolism in diverse environments

Module

rpd_M00168

CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:rpd00620]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:rpd00710]
Metabolism; Energy metabolism; Methane metabolism [PATH:rpd00680]

SSDB

Motif

Pfam:

PEPcase PEPcase_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2102526..2105327

AA seq 933 aa
MSSTILPTDPDVLPNRADDSAFIEEDTRLRNDIRLLGRILGDTVRDQEGSAVFDLVERIR
QTSIRFHRDEDKPARRELEAILDDMSASDTVKIVRAFSYFSHLANIAEDQNNIRQMRAGS
TAGSAPRAGMLAKTLAHAREEGIGARELREFFKTALVSPVLTAHPTEVRRKSTMDREMEV
AALLDQRERLQLTADEWAQNEEQLRRAVVTLWKTNLLRRTKLTVLDEVANGLSFYDYTFL
REVPRLHSALEDQLGGGEGGEAEEELASFLRMGSWIGGDRDGNPFVTAEVLQGTLRLQSA
RVLRFYLDELHELGSELSLASHLAPITEDVRLLAERSPDHSPHRRHEPYRLAVSGIYARL
AATAAKLKIDSVRAPVGEAEIYANVQEFKADLDAIHYSLTKYNAGVIARGRLRQLRRAAD
CFGFHLASLDMRQNSAVHERTMGELMDAARPTSSYLALDEDERIALLTGELRSARPLTSI
FIKYSDETVGELAVLHEAARAHSIYGEAAIPQCIISMTKGVSDLLEVAVLLKEVGLIDPS
GRCAINIVPLFETIEDLQACAAIMDRLLAIPEYRRLVDSRGGVQEVMLGYSDSNKDGGFV
TSGWELYKAEIGLLDVFEHHGVRLRLFHGRGGSVGRGGGPSYDAIVAQPGGAVNGQIRIT
EQGEIITSKYSNREVGRNNLEILTAATLEASLLQPRRSAPHHDYLEAMEQLSALAFKAYR
GLVYETDGFVDYFWSSTVINEISTLNIGSRPASRKKTRAIEDLRAIPWVFSWAQCRLMLP
GWYGFGSAVEAWVAEHPDKGTAFLQSMYQEWPFFRMLLSNMDMVLSKSSIAIASRYADLV
PDEELRHKIFGRIRIEWHASVDSLLAIMGHERLLQGNPLLERSIRHRFPYLDPLNHVQVQ
LLREHRTHDPDEQVLRGIQLTINGISAGLRNSG

NT seq 2802 nt +upstreamnt +downstreamnt
atgtcgtccacgatcctgccgaccgaccccgacgttctgccgaaccgggcggacgacagc
gcttttatcgaagaggacaccaggcttcgcaatgacatacggctgttgggccggatactt
ggcgataccgtgcgcgaccaggagggctctgcggtgttcgacttggtcgaacgcatccgg
cagacctccatccggtttcaccgggacgaggacaagccggcgcgacgcgaactcgaagcg
atcctcgacgacatgtcggcctcggacacggtgaagatcgtccgggcattcagctacttt
tcgcatctcgccaacatcgccgaagatcaaaacaacatccgccagatgcgcgccggctcg
acggcaggctcggcgcctcgcgcggggatgctggccaagaccctggcgcatgcgcgcgag
gaagggatcggcgcgcgcgagctgcgcgaattcttcaagaccgcgctggtcagcccggtg
ctgacggcgcatccgaccgaggtgcgccgcaagagcacgatggaccgcgagatggaggtc
gcagcgctgctcgatcaacgcgagcgcctccagctcaccgctgacgagtgggcgcagaac
gaggagcagcttcgtcgcgcggtggtgacgctgtggaaaaccaacctgctgcgccggacc
aagctgacggtgctcgacgaagtcgccaacggcctgtcgttctatgactacaccttcttg
cgcgaagtgccgcggctgcacagcgcgttggaggatcagctcggcggcggcgagggcggc
gaagcggaagaggagctggcgagtttcctgcggatgggaagctggatcggcggcgatcgc
gacggcaatccgttcgtcacagccgaggtgctgcaggggacgctgcggttgcagagcgcg
cgcgtgctgcggttctatctcgacgagctgcacgagctcggctcggagctgtcgctggcg
tcgcatctcgccccgatcaccgaagacgtccgtttgctagctgaacgttcgcccgatcat
tcgccgcatcgccgccacgagccctatcggctggcggtgtcaggcatctatgcgaggctc
gccgccaccgcggcgaagctgaagatcgacagcgtccgcgccccggtcggcgaggccgag
atttacgccaacgtgcaggagttcaaagccgacctcgatgcgatccattactcgctgacc
aaatataatgccggcgtgatcgcgcgcggcagactccggcagctgcgccgcgccgccgac
tgtttcggctttcatctcgccagcctcgacatgcggcaaaactcagcggtgcacgagcgc
actatgggcgagctgatggacgcggcgcggccgaccagctcctatctggcgctcgatgag
gacgaacgcatcgcgctgctcaccggcgaactgcgcagcgcccggccgctgacctcgatt
ttcatcaagtatagcgacgagaccgtcggcgaactcgcggtgctgcacgaggcggcgcgg
gcgcactccatttatggcgaggcggcgattccccagtgcatcatctcgatgaccaagggc
gtgtccgatctgctcgaggtcgcggtgctgctcaaggaagtcgggctgatcgatccatcg
ggccgttgcgcgatcaacatcgtgccgctgttcgagaccatcgaagacctgcaggcctgc
gccgcgatcatggaccggctgctggcgatcccggaatatcgccgcctggtcgacagccgc
ggcggcgtgcaggaggtgatgctcggttactccgacagcaacaaggacggcggcttcgtc
acatccggttgggagctctacaaggccgagatcggcttgctcgacgtgttcgagcaccat
ggcgttcggctgcggctgttccacggccgcggcggttcggtcggccgcggcggcggcccg
agctacgacgcgatcgtagcgcagccgggcggcgcggtgaacggccagattcgcatcacc
gagcagggcgagatcatcaccagtaaatattccaaccgcgaggtcggtcgcaacaatctg
gaaatcctcaccgcggcgacgctggaggcgagcctgctgcagccgcgccgcagcgcgcca
caccacgactatctggaagcgatggagcagctctcggcgctggccttcaaggcgtatcgc
ggactggtctacgagaccgacggcttcgtcgactacttctggtcgtcgactgtgatcaac
gagatctcgacgctgaacatcggcagccgcccggcatcgcgcaagaagacccgcgcgatc
gaggatctgcgcgccatcccctgggtgttctcttgggcgcaatgccggctgatgctgccg
ggctggtacggcttcggcagcgcggtcgaggcctgggtcgccgagcatcccgacaagggc
actgcgttcctgcagtcgatgtatcaggagtggccgttcttccgcatgctgctctccaac
atggacatggtgctgtcgaagagttcgatcgcgatcgcctcgcgctacgccgatctggtg
ccggatgaggagttgcggcacaagatcttcggccgcatccgcatcgaatggcatgcctcg
gtcgatagcctgctcgcgatcatgggccacgaacggctgctgcagggcaacccgctgctg
gagcgctcgatccgccaccgcttcccgtatctcgacccgcttaaccacgtccaggtgcag
ctcctgcgcgagcaccgcacccacgatcccgacgagcaggtgctgcgcgggattcagctg
accatcaacggaatttcggcggggctgcggaatagcgggtga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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