KEGG   Rhodopseudomonas palustris BisB5: RPD_2305
Entry
RPD_2305          CDS       T00345                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rpd  Rhodopseudomonas palustris BisB5
Pathway
rpd00260  Glycine, serine and threonine metabolism
rpd00460  Cyanoamino acid metabolism
rpd00630  Glyoxylate and dicarboxylate metabolism
rpd00670  One carbon pool by folate
rpd00680  Methane metabolism
rpd01100  Metabolic pathways
rpd01110  Biosynthesis of secondary metabolites
rpd01120  Microbial metabolism in diverse environments
rpd01200  Carbon metabolism
rpd01230  Biosynthesis of amino acids
rpd01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    RPD_2305
  09102 Energy metabolism
   00680 Methane metabolism
    RPD_2305
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RPD_2305
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    RPD_2305
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    RPD_2305
Enzymes [BR:rpd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     RPD_2305
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Cys_Met_Meta_PP Aminotran_5
Other DBs
NCBI-ProteinID: ABE39537
UniProt: Q138F2
Position
2572328..2573632
AA seq 434 aa
MSTSAALQAVQNIGNSGVSAAGLSAADTAVAVAISNERIRQRESIELIASENFVSQAVLD
AQGSVLTNKYAEGYPHRRYYGGCVNVDVVEDLAIARVNQLFGSAYANVQPHSGSQANQAV
FLALLTPGDTILGLDLKAGGHLTHGAPVNMSGRWFNVVSYGVDPKTHLIDMDQVADLARR
HRPKLLIAGGSAYPRILDFARFRKIADEVGAILMVDMAHFAGLVAGGVYPSPVAFADVVT
STTHKTLRGPRGGFVLTNDAELAKKINSALFPGLQGGPLMHVIAAKAVAFGEALQPSFKT
YAQAVVENCRVLAQALTDGGLTITSGGTDCHLAVVDLRPFGITGNVAEKALESVGITLNK
NAVPNDPEKPMVTSGIRVGTAAGTSRGFGVDEYREIATLILDTLQAVRAGTLDADRQGIN
ARVRQLVARFPLPY
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgagcacatcggccgcgctgcaggcagttcagaacatcgggaactcaggcgtgagcgct
gccggcttgtccgcggccgacaccgccgttgctgttgcgatttccaacgagagaatccgc
cagcgcgagtcgatcgaactgatcgcctcggagaatttcgtcagccaggcggtgctcgac
gcgcagggctcggtgcttaccaacaaatacgccgaaggctatccgcaccgccgctactat
ggcggctgcgtcaatgtggatgtggtggaggatctggcgattgcgcgcgtgaaccagctg
ttcggcagcgcttacgccaatgtccagccgcattcgggcagccaggccaatcaggcggtg
tttctcgcgctgctgacgccgggcgacacgatcctcggcctggatctgaaggccggcgga
cacctgacccatggcgcgccggtcaacatgtccggccgctggttcaatgtcgtcagctat
ggtgtcgaccccaaaacccatctcatcgacatggatcaggtcgctgatctggctcgccgg
catcggccgaagttgctgattgccgggggctcagcctatccgcgcatcctcgactttgcg
cgcttccgcaagatcgccgacgaggtcggtgcgatcctgatggtcgatatggcgcatttc
gccgggctggtggctggcggcgtctatccgtcgccggttgctttcgccgacgtcgtcact
tcgaccacgcataagacgctgcgcggcccgcgcggcggttttgttctgactaacgacgcg
gagctggcgaagaagatcaattccgcgctgttccccggccttcagggcggtccgctgatg
catgtcatcgccgcgaaggcggtggcgttcggcgaagccctgcaaccgtcattcaagacc
tatgcgcaggccgtggtcgagaattgccgcgtcttggcgcaggcgctgaccgatggcggc
ttgacgatcacctccggcggcacggattgccatctggcggtggtcgatctgcgcccgttc
ggcatcaccggcaatgtcgcagagaaggcgctggagtcggtcggcatcacgctcaacaag
aatgcggtcccgaacgatccggaaaagccgatggtgacctccggcatccgcgtcgggacg
gccgcaggcacgtcgcgtggatttggcgtggacgagtatcgtgagatcgccacgctcatt
ctcgatacgctccaagccgtccgcgccggaacgctcgatgcggatcggcaagggatcaac
gcgcgcgtacgccagctggtggcgcgctttccattgccttactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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