KEGG T00345: RPD

Rhodopseudomonas palustris BisB5: RPD_4228

Entry

RPD_4228 CDS T00345

Definition

twin-arginine translocation pathway signal

Orthology

K01113

alkaline phosphatase D [EC:3.1.3.1]

Organism

rpd Rhodopseudomonas palustris BisB5

Pathway

rpd00627	Aminobenzoate degradation
rpd00790	Folate biosynthesis
rpd01100	Metabolic pathways
rpd01120	Microbial metabolism in diverse environments
rpd02020	Two-component system

Module

rpd_M00126

Tetrahydrofolate biosynthesis, GTP => THF

Class

Metabolism; Metabolism of cofactors and vitamins; Folate biosynthesis [PATH:rpd00790]
Metabolism; Xenobiotics biodegradation and metabolism; Aminobenzoate degradation [PATH:rpd00627]
Environmental Information Processing; Signal transduction; Two-component system [PATH:rpd02020]

SSDB

Motif

Pfam:

PhoD TAT_signal

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

4695402..4697009

AA seq 535 aa
MSRQPLRSGLSLDRRTLLRGAIGAGLAGTLPSISGAAARTSFKSDPFTLGIASGDPAPDG
FVLWTRLAPEPLEARGGMTAHPVEVTVEIAHDPAMSRILRTDKAIARLELAHSVHVEVEG
LSPARDYFYRFRAGDAESPIGRARTLPPPDATPAQLRFVAAGCQRWEGGYYTAWRAIADD
QLDFVFHYGDYIYEYAFAARDKDDRPNPRTMPPDFPACFTLTDYRRRYALYKGDPDLQAA
HASCPFLSSFDDHEIANNWASDSDPKQTPAAAFLFRRAMALQAWYEHMPVRRALIPRGPD
VLAYRGFRIGTLADIAVLDTRQYRSRQPCGDGFRAHCDDVDAADRTMLGGAQERWLAERL
KRSKTVWQVLAQQVLFAQFDWRGFPWAKQTDGPLLDMDTWNGADAARDRVMAMLAEANPS
NPVVLTGDLHRALAFELRRDWRDPNSPRIGVEFVSSSISSPGDGPTTGDNLATMYKNNPN
LKFFSDQRGYTRHEVTRSRWQADVRVVDDITARGQPVRTARTLLVEAGRPGLLGN

NT seq 1608 nt +upstreamnt +downstreamnt
atgtcccgtcaaccactgcgctccggcctgtcgctcgaccgtcgcacgctgctgcgcggc
gcgatcggcgccggcctggcaggcacgctgccatccatcagcggcgcggcggcgcggacg
tcgttcaagtccgacccgttcacgcttggaatagcttcgggcgatccggcgccggacggc
ttcgtgctgtggacccggctcgcaccggaaccgcttgaagcgcgcggcggcatgaccgcg
cacccggtcgaagtgacggtcgagatcgcccacgaccctgcgatgtccaggattcttcgc
accgataaggcgatcgcccggctcgaactggcgcattcggtgcacgtcgaggtcgaaggg
ctgtcgcccgcgcgcgattacttctaccgttttcgtgccggcgacgccgagagcccgatc
ggccgcgcccgcaccctgccgccgccggacgccacaccggcgcagctccgcttcgtggcg
gcgggctgccagcgatgggaaggcggctactacaccgcctggcgcgcgatcgccgacgat
cagctcgacttcgtgttccactatggcgactacatctacgaatacgccttcgccgcgcgt
gacaaggacgacaggccgaatccgcgcacgatgccgccggacttcccggcctgcttcacc
ttgaccgactatcggcgccgttacgcgctttacaaaggcgacccggatctgcaggcggcg
cacgcttcctgtccgttcctgtcgagcttcgacgaccacgagatcgccaacaactgggcg
agcgacagcgacccgaaacagacgccggccgcggccttcctgtttcgccgcgcgatggca
ctgcaggcctggtacgaacacatgccggtgcgccgcgcactgatcccgcgcggcccggac
gtgctcgcctatcgcggcttccggatcggcacgctcgccgatatcgccgtgctcgacacc
aggcaatatcgctcgcgccagccctgcggcgacggcttccgtgcccattgcgacgacgtc
gatgcagccgatcgcaccatgctcggcggcgcgcaggagcgatggctggcggagcggctg
aagcggagcaagacggtgtggcaggtactggcgcagcaggtactgttcgcgcagttcgac
tggcgcggcttcccgtgggcgaagcagaccgacgggccgctgctagacatggacacctgg
aacggcgccgatgcggcgcgcgaccgggtgatggcgatgctcgcggaggccaatccgtcc
aacccggtggtgctgaccggcgacctgcaccgcgcgctcgcgttcgagctgcggcgcgac
tggcgcgatccgaactcgccgcgcatcggcgtcgagttcgtgtcgagttcgatctcgtcg
cccggcgacggcccgacgactggggacaatctggcgacgatgtacaagaacaacccgaac
ctgaaattcttcagcgaccagcgtggctacacccgccacgaggtgacccgaagccgatgg
caggccgatgtccgggtcgtcgacgacatcaccgccaggggtcagccggtcagaaccgca
cgaaccctgctggtcgaagccgggcggcccgggctgctcggcaactga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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