KEGG T00345: RPD

Rhodopseudomonas palustris BisB5: RPD_4240

Entry

RPD_4240 CDS T00345

Definition

8-amino-7-oxononanoate synthase (EC:2.3.1.47)

Orthology

K00652

8-amino-7-oxononanoate synthase [EC:2.3.1.47]

Organism

rpd Rhodopseudomonas palustris BisB5

Pathway

rpd00780	Biotin metabolism
rpd01100	Metabolic pathways

Module

rpd_M00123

Biotin biosynthesis, pimeloyl-ACP/CoA => biotin

Class

Metabolism; Metabolism of cofactors and vitamins; Biotin metabolism [PATH:rpd00780]

SSDB

Motif

Pfam:

Aminotran_1_2 Cys_Met_Meta_PP DegT_DnrJ_EryC1 Beta_elim_lyase SHMT

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4708011..4709237)

AA seq 408 aa
MRRIRRRRICCDGASTALLADGVPRASGKTRIMHEAFETDLRGLAGRGRLRALRDRAGLD
FTSNDYLGLAESDELRGAAADAVARGVPVGSGGSRLLRGNHPEHEALEAEAAAYFGAETA
LYFGGGYVANLAIFSTLPQRGDLVVHDALIHASAHEGLRRCRAECVAAAHNDVDAFDAAI
SRWRAAGGKGRPWIAVESIYSMDGDSPDLAALFAVAERHEAMMVIDEAHATGVLGPQGRG
LAASFEGRDNVVTLHTCGKALGTVGGFILAPRTIRDFLVNRARPFIFATAPSPLIAAITR
ASLELSRSNPERRDRLARLVQFAGGELRRRCAIEPSGSHILPVIIGADQAAVAVAASLQR
RGFDVRAIRPPTVPEGTARLRIALTTNVDETDVADLFEALGEDIRKAA

NT seq 1227 nt +upstreamnt +downstreamnt
atgaggcgaatccgtcggcgacggatttgttgcgacggagcttccaccgctctcctggcg
gatggcgtgccccgcgcgagtggaaagacgaggatcatgcacgaggcgttcgagaccgat
ctgcgcgggctcgcagggcgaggccggctgcgcgcgctgcgcgaccgcgcgggactggat
ttcacgtcgaacgactatctcggcctcgctgaatccgacgaattgcgaggcgccgccgcc
gacgcggtggcgcgtggcgtgccggtggggtcggggggatcgcggctgttgcgcggcaat
catccggagcatgaggccctcgaagccgaggccgcggcctatttcggcgccgagaccgcg
ctgtatttcggcggcggttacgtcgccaatctggcgatcttctcgacgctgccgcagcgc
ggggatctggtcgtccacgacgcattgatccatgccagcgctcacgaggggctgcgccgg
tgccgcgccgaatgcgtggcggcggcgcataatgatgtcgacgccttcgacgcggcgatc
agccgctggcgcgcggccggcggcaagggccggccgtggattgcggtcgagagcatctac
agcatggacggcgacagccccgacctcgctgcgctgttcgccgtcgcggagcgccatgag
gcgatgatggtgatcgacgaggcgcatgcgaccggcgtgctcgggccgcagggccggggg
ctcgccgcaagtttcgaaggccgcgacaatgtcgtcacgctgcacacctgcggcaaggcg
ctcgggacggtcggcggcttcatcctcgcgcctcgaacgatccgggattttctcgtcaac
cgggctcgcccgttcatcttcgcgaccgcgccgtcgccgctgatcgccgcgatcacgcgt
gcgtcgctcgaattgtcgcggagcaatcccgagcgccgcgaccgattggcgcgtctggtt
cagttcgcgggcggcgagcttcgccgtcgttgcgccatcgaaccctcgggttcgcatatt
ctgccggtgatcatcggcgccgaccaggcggccgttgcggtcgctgcgtcgttgcaacgc
aggggctttgatgtccgcgcgatccgcccgccgaccgtgcccgaaggcaccgcgcgcttg
cgcattgcactgaccacgaatgtcgacgaaaccgatgtcgcagatttgttcgaagcgctc
ggtgaagacatccggaaggccgcatga

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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