KEGG   Rhodopseudomonas palustris BisA53: RPE_0471Help
Entry
RPE_0471          CDS       T00400                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rpe  Rhodopseudomonas palustris BisA53
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rpe00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RPE_0471
Enzymes [BR:rpe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RPE_0471
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RPE_0471
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
520601..521482
Genome map
AA seq 293 aa AA seqDB search
MPELPEVETVRLGLQPAMEGARFDTVALRRADLRFPFQPDFTDRLTGQTVTGLSRRAKYL
LADLSSGDALLMHLGMSGSFRVIEPGGEATPGDFHHPRSEDRSHDHVVFSMSSGKTVVFN
DPRRFGYMKLFRRAAIEDEPFLKGLGPEPLGNAFDASMLARACAGKKTSLKAALLDQRVV
AGLGNIYVCEALFRAHLSPKRLAATLATKAGGPTERAEKLVEAIRTVLHEAIQAGGSSLR
DHRQTSGELGYFQHSFAVYDRESEPCRTKGCGGVVKRFVQNGRSTFCCPKCQK
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattgcccgaagtggaaaccgtgcggctgggcttgcagccggcgatggagggc
gcccgcttcgacacggtggccttgcgccgggccgacctgcggttcccgttccagcccgac
ttcaccgaccggctgaccggccagaccgtgaccgggctcagccgccgcgccaaatatctc
ttggccgacctctccagcggcgacgcgctgttgatgcatctcggcatgtccggctcgttc
cgggtgatcgagccgggcggcgaggcgacgccgggcgacttccaccacccccgctccgag
gaccgcagccacgaccacgtggtgttttcgatgtcgtcgggcaagacggtggtgttcaac
gatccgcgccggttcggctacatgaagctgtttcgccgcgccgcgatcgaggacgagccg
tttctcaaagggctggggccggagccgctcggcaacgccttcgatgcttcgatgctggcg
agggcatgcgccggcaaaaaaacctcgctgaaggcggcgctgttggaccagcgcgtggtc
gcggggctcggcaacatctatgtctgcgaggcgctgtttcgcgcgcatctttcgcccaaa
cgcctcgccgcgacgctcgccaccaaagctggcgggccgaccgagcgcgccgaaaaactg
gtcgaagcgatccgcaccgtgctgcacgaggcgatccaagccggcggctcgtcgctgcgc
gaccaccgccagacctcgggcgaactcggctatttccagcattcgttcgcggtctacgac
cgcgaaagcgaaccgtgccggaccaagggctgcggcggtgtggtgaagcgctttgtgcag
aacgggcgatcgacgttctgctgcccgaagtgccagaagtga

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