KEGG T00400: RPE

Rhodopseudomonas palustris BisA53: RPE_3780

Entry

RPE_3780 CDS T00400

Definition

3-hydroxyacyl-CoA dehydrogenase

Orthology

K07516

3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]

Organism

rpe Rhodopseudomonas palustris BisA53

Pathway

rpe00071	Fatty acid metabolism
rpe01100	Metabolic pathways
rpe01120	Microbial metabolism in diverse environments

Class

Metabolism; Lipid metabolism; Fatty acid metabolism [PATH:rpe00071]

SSDB

Motif

Pfam:

ECH 3HCDH_N 3HCDH ApbA DAO NAD_binding_2 NAD_Gly3P_dh_N Pyr_redox F420_oxidored AlaDh_PNT_C TrkA_N Pyr_redox_2 Methyltransf_23 UDPG_MGDP_dh_N ThiF

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4227740..4229824)

AA seq 694 aa
MSEVVKLESRGGVAIVTIDSPPVNALSAAVRRGIHQQVSAAVADPAVHAIVLTCGGRTFI
AGADITEFGKPPQPPSLHEVISTLENSPKPVIAAIHGTALGGGLEVALGCHFRVAVKEAK
LGLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVSGEPIGASEALQHGLIEEIVEGPAAG
GEAFARKVLAEKRPLRKLRDDDAKLAAAKADRSIFTNAVAAMTKKARGLEAPFACADAIA
AAIDLPFDEGLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVEVPEATRPRPVNKVAII
GAGTMGGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNYEATAARGGIPADAPAKRMG
LITGVVGLEHVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNIDEIAAT
TKRPQDVLGMHFFSPANVMKLCEIVRAAKTAPDALLTAVSIARKIAKVPAVVGVCDGFVG
NRMLAQRAKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRQDRGIKS
EIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPEVETLIDQTLQKLDLKRRAIDDQEIL
ERMMYPMINEGARILEEKIAARPSDIDVIWLYGYGWPIYRGGPMHYADSVGLKQIAERLS
HYAKATNDPSLEPAPLLARLAAEGKTFASLAKAG

NT seq 2085 nt +upstreamnt +downstreamnt
gtgagcgaagttgtgaagctggaaagccgcggtggcgtcgcgatcgtcaccatcgacagc
ccgccggtcaacgcgctgagcgcggcagttcgtcgcggcattcatcaacaggtgagcgcc
gccgtcgccgatcccgcggtgcacgcgatcgtgctgacctgcggcggccgcaccttcatc
gccggcgccgacatcaccgaattcggcaagccgccgcagccgcccagcctgcacgaagtg
atttccacgctggagaattcgccgaagccggtgatcgccgcgatccacggcaccgcgctc
ggcggcggcctcgaagtcgcgctcggctgccattttcgcgtcgcggtgaaggaagccaag
cttggtttgccggaagtaaaactcggcctgctgcccggcgccggcggcacgcagcgcctg
ccgcgcgcggtcggccccgaactcgcggtcaagatgatcgtctcgggcgagccgatcggc
gccagcgaggcgttgcagcacggcctgatcgaggaaatcgtcgaaggccccgccgcgggc
ggcgaagcctttgcgcgcaaagtgctggccgagaagcggccgctgcgcaagctgcgcgac
gatgacgcaaagctcgccgcggcgaaggccgatcgctcgatcttcaccaatgcggtggcg
gcgatgaccaagaaggcgagggggctggaagcgccgttcgcctgcgccgacgccatcgcg
gccgcgatcgatctgccgttcgacgaaggcctgaagaaggagcgcgaaggctttatgaag
ctggtcgtctccgaccagtcgaaggcgcagcgctacgccttcttcgccgagcgcgaagcg
gccaaggtcgaggtgccggaggcgacccggccgcgcccggtcaacaaggttgccatcatc
ggcgccggcaccatgggcggcggcatcgcgatgtcgtttgccaatgccgggattccggtg
acgctgatcgagaccggcgaggagcaattgaagcgcggcctcggcatcatgcagaagaac
tacgaggccaccgccgcgcgcggcggcattccggccgatgcgccggccaagcgcatgggg
ctgatcaccggcgtggtcgggctcgaacacgtcaaggacgccgatctgatcatcgaggcg
gtgttcgagaccatggcggtgaagaaggaagtcttcaccgcgctcgacgcctatgccaag
cccggcgcggtgctggcatccaacacctcgtatctcaacatcgacgagatcgcggcgacc
accaagcggccgcaggacgtgctcggcatgcacttcttctcgccggccaatgtgatgaag
ctgtgcgagatcgtccgcgccgccaagaccgcgcccgacgcgctgctgacggccgtttcc
atcgcgcgcaaaatcgcaaaagtgccggcggtggtcggcgtgtgcgacgggttcgtcggc
aaccgcatgctggcgcagcgcgccaagcaggccgaaaaactgttgttcgaaggcgcgctg
ccgcagcaggtcgacgccgtggtgaccaagttcggcatgccgatgggcccgttcgcgatg
ggcgacctcgccggcctcgacatcggctggcgctcgcggcaggaccgcggcatcaagtcg
gaaatcgccgatgccttgtgcgaagccggccgcttcggccagaagaccggcaagggctac
tacaaatatgaagccggctcgcgcgcgccgctgcccgatcccgaggtcgagacgctgatc
gaccagacgctgcaaaagctcgacctgaagcgccgcgcgatcgacgatcaggaaatcctg
gagcggatgatgtatccgatgatcaacgagggcgcccgtatcctggaagaaaagatcgcg
gcgcggccctccgacatcgacgtgatctggctctacggctacggctggccgatctatcgc
ggcggcccgatgcactacgccgacagcgtcgggttgaagcagatcgccgagcgcctgtcg
cactacgccaaggcgaccaacgatccttcattggagcccgcgccgctgctcgcgcgcctc
gccgccgaaggcaaaaccttcgcctcgctggcgaaggccgggtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (17)   
   KEGG COMPOUND (17)   
Chemical reaction (8)   
   KEGG ENZYME (1)   
   KEGG REACTION (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (51)   

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