KEGG   Rhodopseudomonas palustris BisA53: RPE_4647
Entry
RPE_4647          CDS       T00400                                 
Name
(GenBank) formate dehydrogenase, alpha subunit
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
rpe  Rhodopseudomonas palustris BisA53
Pathway
rpe00630  Glyoxylate and dicarboxylate metabolism
rpe00680  Methane metabolism
rpe01100  Metabolic pathways
rpe01120  Microbial metabolism in diverse environments
rpe01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:rpe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    RPE_4647
  09102 Energy metabolism
   00680 Methane metabolism
    RPE_4647
Enzymes [BR:rpe01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     RPE_4647
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Fer2_4 NADH-G_4Fe-4S_3 Molybdop_Fe4S4 Fer4_7 Fer4 Fer4_10 Fer4_9 Fer4_21 Fer4_6 Fer4_15 Fer4_8 Fer4_2 TPP_enzyme_M
Other DBs
NCBI-ProteinID: ABJ08567
UniProt: Q07HL7
Position
complement(5217349..5220195)
AA seq 948 aa
MSLIHEIDYGTPRSKSETMVTLSIDGQSVTVPEGTSIMRAAMEIGTQIPKLCATDMMDAF
GSCRLCLVEVEGRAGTPASCTTPVAEGIVVRTQTERLKQLRKGVMELYISDHPLDCLTCS
ANGDCELQDMAGAVGLRDVRYGQNGEQHPNPGIDASNPYFTYDPSKCIVCSRCVRACEDV
QGTFALTIAGRGFDSVVSAGMQESFLGSECVSCGACVQACPTATLNEKSIIEIGTPEHSV
VTTCAYCGVGCSFKAEMRGEEVVRMLPYKDGKANRGHSCVKGRFAWGYATHRERILKPMI
REKITDPWREVSWVEAFTYAASEFTRIQQTYGRDSIGGITSSRCTNEETYLVQKLIRAGF
GNNNVDTCARVCHSPTGYGLSTTFGTSAGTQDFDSVEHTDVVIIIGANPTDGHPVFASRL
KKRLREGAKLIVVDPRRTDIVRSARVEAAHHLALLPGTNVAVLTALAHVIVTEGLAAEAF
VRERCDWQEFQDWAAFVSLPHNSPEATALATGVDPTELRQAARLFATGGNGAIYYGLGVT
EHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGACDMGSFPHELPGYRHIATD
SVRESFEQLWGVTLNKEPGLRIPNMLDAAVDGSFKALYVQGEDILQSDPNTKHVAAGLAA
MECVIVHDLFMNETANYAHVFLPGSTFLEKNGTFTNAERRIQRVRKVMAPRNGLEDWEVT
IGLGKAMGFAMTYDHPSQIMDEIAALTPTFAGVSYQKLDELGSVQWPCNDKMPEGTPVMH
IDHFVRGKGKFVITEYVATDEKTGPRFPLLLTTGRILSQYNVGAQTRRTANVVWHDEDRL
EIHPHDAEQRGVRDGDWVRLASRAGETTLRALITERVAPGVVYTTFHHPDTQANVVTTEY
SDWATNCPEYKVTAVQVSPSNGPSEWQKTYDEQARNARRIAAAIEAAE
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgtcgctgattcatgaaatcgactacggcacgccgcgctccaagtccgagacgatggtg
acgctgagcatcgacggccaatccgtcacggtgccggagggcacctcgatcatgcgcgcg
gcgatggagatcgggacgcaaatcccaaagctctgcgccaccgacatgatggacgcgttc
ggctcctgccggctctgcctcgttgaggtggagggccgcgcgggcacgccggcctcctgc
acgacgccggtggccgaggggatcgtcgttcgcacccagactgagcggctgaagcaattg
cgcaagggggtgatggagctctacatctccgaccatccgctggattgcctgacctgctcg
gccaatggcgattgcgaattgcaggatatggccggcgcggtgggcctgcgcgacgtgcgc
tacggccagaacggcgagcagcatcccaaccccggcatcgacgcctcgaatccgtacttc
acctacgatccgtcgaaatgcatcgtctgctcgcgctgcgtccgcgcctgcgaggacgtg
cagggcacttttgcgctgaccatcgccggccgcggtttcgactcggtggtgtcggcgggg
atgcaggagtcgttcctgggctcggaatgcgtgtcctgcggcgcctgcgtgcaggcctgc
ccgaccgcgacgctgaacgagaaatcgatcatcgagatcggtacgccggaacattcggtg
gttactacttgcgcctattgcggcgtcggctgctcgttcaaggccgagatgcgcggcgag
gaagtggtgcggatgctgccctataaggacggcaaggccaatcgcggccactcctgcgtc
aagggccgcttcgcctggggctacgccacccatcgcgagcgcatcctgaagccgatgatt
cgcgaaaagatcaccgatccgtggcgcgaagtgtcgtgggtcgaggcgttcacttacgcc
gcgtcggaattcacgcgtatccagcagacctatggccgcgactcgatcggcggcatcacc
tcgtcgcgctgcaccaatgaagagacctatctggtgcagaagctgatccgcgccggcttc
ggcaacaacaatgtcgatacttgcgcgcgggtgtgccactcgccgaccggctatggcctc
tcgaccaccttcggcacctcggccggcacgcaagacttcgactcggtcgagcacaccgac
gtggtgatcatcatcggcgccaatccgaccgacggccatccggtattcgcgtcgcggctg
aagaagcggctgcgcgaaggagcaaaactcatcgtggtcgatccgcgccgtaccgatatc
gtgcgctcggcccgagtcgaggcggcgcatcatctggccttgctgccgggcaccaatgtc
gcggtgctgaccgcgctggcgcatgtcatcgtcaccgaggggctcgccgccgaggccttc
gtgcgcgagcgctgcgattggcaggaattccaggactgggcggcgttcgtatcgctgccg
cacaatagcccggaggcgaccgcgctcgccaccggcgtcgacccgaccgagctgcgccag
gcggcgcggctgttcgccaccggcggcaatggcgcgatctattacggtctcggcgttacc
gaacacagccaaggctcgaccacggtgatggcgatcgccaatctggcgatggccaccggc
aatatcggccgccccggcgtcggcgtgaatccgctgcgcggccagaacaacgtgcagggc
gcctgcgacatgggctcgttcccgcacgaactgccgggctatcgccatatcgccaccgac
tccgtgcgcgagagctttgagcaactatggggcgtgacgctgaacaaggagccggggctg
cgcatccccaacatgctcgacgccgcggtcgacggctcgttcaaggcgctctatgtgcag
ggcgaggacattctgcagtccgatcccaacaccaagcacgtcgcggcgggattggccgcg
atggagtgcgtcatcgtgcatgatctgttcatgaacgagaccgcgaactacgcccacgtc
ttcctgccgggctccaccttcctggagaagaacggcaccttcaccaatgccgaacgccgc
atccagcgcgtgcgcaaggtgatggcgccgcgcaacgggctggaggactgggaggtcacc
atcgggctcggcaaggcgatgggttttgcgatgacctacgatcacccgtcgcagatcatg
gacgagatcgcggcgctgacgccgactttcgccggcgtgtcctaccaaaaactcgacgaa
ctgggctcggtgcagtggccgtgcaacgacaagatgccggaaggcacgccggtgatgcat
atcgatcacttcgtgcgcggcaagggcaagttcgtcatcaccgaatatgtcgcgaccgac
gagaagaccgggccgcgtttcccgttgctgctcaccaccgggcgaattctcagccagtac
aatgtcggcgcgcagaccaggcgcacggcgaatgtggtgtggcacgacgaggaccggctc
gaaatccatccgcacgacgccgagcagcgcggcgtgcgcgatggcgactgggtgcggctg
gcgagccgcgccggcgagaccacgctgcgcgcgctgatcaccgagcgcgtcgcgccgggc
gtggtctacaccacgtttcatcaccccgatacgcaagccaacgtcgtcaccaccgaatat
tccgactgggccaccaattgtccggaatacaaggtcaccgcggtgcaggtgtcgccgtcg
aacgggccgtcggaatggcagaagacctatgacgagcaggcgcgaaacgcccggcggatc
gccgccgccatcgaagccgcggagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (34)   

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