KEGG   Ralstonia pickettii 12D: Rpic12D_0281Help
Entry
Rpic12D_0281      CDS       T00925                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rpf  Ralstonia pickettii 12D
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rpf00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rpic12D_0281
Enzymes [BR:rpf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rpic12D_0281
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rpic12D_0281
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:291388..292263
Genome map
AA seq 291 aa AA seqDB search
MPELPEVEVTRLGLIPHITERRIVRVVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL
LIECMPEAEQSGGCAETAGGWLLIHLGMTGTLRVLETAVPPGLHDHVDIELAGATGVPVT
LRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVAIKSAL
LAGDIVVGVGNIYCSESLFRAGIRPTTAAGRIGRPRYAALAEAIRATLADAIARGGSTLR
DFVGSDGQSGYFQLDAFVYDRAGLPCRVCGTPVRQIVQGQRSTFYCPTCQR
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttgccggaggtcgaggtcactcgcctgggtttgataccgcatattacggag
cgacgtatcgttcgcgtggtggtgcgccatcacggcttgcgctggcccgtcgatccggcg
ttgccggagttgctggccggtctgactgtcacgcgcttgctgcgccggggcaaatacctg
ctcatcgaatgcatgcccgaggccgaacaatccggcggctgcgccgaaaccgcaggcggc
tggttgctgatccatcttggtatgacaggcaccttgcgcgtgctggaaacggccgtgccg
cccggcctgcacgatcacgtcgatatcgaactcgccggcgcaactggcgtacccgtcaca
ctgcgctatcgggatccgcgccgctttggtgccgtgctttggcatgcaggcgacgaagcc
ggcctggccgaacacccgctgctgcgcaacctcggcatcgagccgttcgacgcgcgattc
gacggcgactggatgtttgcccgcacgcgcggacgccgggtggccatcaagtcggcgctc
ttggcgggcgacatcgtggtcggcgtgggcaacatctattgttcggaaagcctgtttcgc
gccggcatccgaccgaccacggcagcgggacgcatcggccgcccgcgctatgcggcgctg
gccgaggccattcgcgccacgctggccgatgccatcgcccggggcggcagcacgctgcgg
gactttgtcggctccgacgggcaaagcggctactttcagcttgatgccttcgtgtacgac
cgcgccggtctgccgtgtcgtgtgtgcggcacgccggtccgccagatcgtgcagggccag
cgctccacgttctactgcccgacctgccagcgctga

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