KEGG T00925: Rpic12D

Ralstonia pickettii 12D: Rpic12D_1811

Entry

Rpic12D_1811 CDS T00925

Gene name

trpA

Definition

tryptophan synthase subunit alpha (EC:4.2.1.20)

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

rpf Ralstonia pickettii 12D

Pathway

rpf00260	Glycine, serine and threonine metabolism
rpf00400	Phenylalanine, tyrosine and tryptophan biosynthesis
rpf01100	Metabolic pathways
rpf01110	Biosynthesis of secondary metabolites
rpf01230	Biosynthesis of amino acids

Module

rpf_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rpf00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rpf00400]

SSDB

Motif

Pfam:

Trp_syntA Peripla_BP_6 His_biosynth PcrB PEP_mutase PI-PLC-X

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(1928250..1929047)

AA seq 265 aa
MSRIAQTFSQLSAQGRKGLIPFITAGDPYPEMTVDLMHALVKGGSNVIELGVPFSDPMAD
GPVIQRASERALAKKVGLRTVLEYVRAFRTTNSTTPVVLMGYANPIERMGVEAFAKAASE
AGVDGVLVVDYPPEECEAFAKTMRAAGIDPIFLLAPTSTEARIAQIARVASGYIYYVSLK
GVTGAATIDLDAVAARIPQIRQHARLPVGVGFGIRDAATARAISGVADAVVIGSRIVQLL
EEAPREQAVQYLTDFIAEIRQALDA

NT seq 798 nt +upstreamnt +downstreamnt
atgtcccgcatcgctcaaacgttctcacaattgtccgctcagggccgcaagggcctgatt
ccgttcatcacggcgggcgacccgtaccccgaaatgacggtcgacctgatgcacgcgctg
gtcaagggcggctccaacgtcatcgaactgggcgtgccgttttccgacccgatggccgat
ggcccggtgatccaacgtgcgtccgagcgtgcattggccaagaaggtcggtctgcgtacg
gtgctggagtatgtgcgggcatttcgcaccaccaattcgaccaccccggtggtgctcatg
ggttacgccaatccgattgagcgcatgggcgtagaagcctttgccaaggctgcatccgaa
gcgggcgtggacggcgtgctcgtggtcgactatccgccggaagaatgcgaggcctttgcc
aagaccatgcgcgccgccggtatcgatccgatcttcctgctggcgcccacgtctacggaa
gcacgcatcgcgcagatcgcccgtgtggcgagcggctacatctactacgtgtcgctcaaa
ggcgtgactggcgcggccaccatcgacctggatgcggtggctgcacggatcccgcaaatc
cgccagcacgcgcggctgccagtaggtgtcggtttcggcatccgtgatgcggcaacggca
cgtgcgatcagcggtgtggcggatgcggtagtcatcggatcccgcattgtgcaattgctt
gaagaagcacctcgcgaacaagcggtacaatacttgactgatttcatcgcggagattcgc
caggcgctcgacgcctga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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