KEGG T00925: Rpic12D

Ralstonia pickettii 12D: Rpic12D_1813

Entry

Rpic12D_1813 CDS T00925

Definition

tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

rpf Ralstonia pickettii 12D

Pathway

rpf00260	Glycine, serine and threonine metabolism
rpf00400	Phenylalanine, tyrosine and tryptophan biosynthesis
rpf01100	Metabolic pathways
rpf01110	Biosynthesis of secondary metabolites
rpf01230	Biosynthesis of amino acids

Module

rpf_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rpf00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rpf00400]

SSDB

Motif

Pfam:

PALP Phage_min_cap2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(1929900..1931093)

AA seq 397 aa
MYNLPDAHGHFGPYGGTFVAETLSHALDELRDAYARYQHDPEFIKEYEYELKHFVGRPSP
IYHARRLTEHCGGAQIYLKREDLNHTGAHKVNNVIGQALLARRMGKPRVIAETGAGQHGV
ATATIAARYGMECVVYMGSEDVRRQAANVYRMKLLGATVVPVESGSRTLKDALNEAMRDW
VTNVADTFYIIGTVAGPHPYPMMVRDFQAVIGEECKVQMPEMTGRQPDAVIACVGGGSNA
MGIFYPYIDHADVKLIGVEAAGEGIETGRHAASLMGGSPGVLHGNRTYLLQDEDGQIIET
HSISAGLDYPGVGPEHAWLKDVQRAEYVGITDKEALQSFHDLCRMEGIIPALESSHALAY
ACKLAPTLPKDKILLVNLSGRGDKDMHTVAEVSGIQL

NT seq 1194 nt +upstreamnt +downstreamnt
atgtacaacctgcccgacgcccacggccattttggcccctacggcggcaccttcgttgcg
gaaacgctgtcccacgcgctggatgaattgcgcgacgcctatgcgcgctaccagcacgat
cccgagttcatcaaggaatacgaatacgagctgaagcacttcgtcggccgcccgtcgccc
atctatcacgcgcgccgcctgaccgaacactgcggcggcgcacagatttacctgaagcgc
gaagacctgaaccacaccggcgcgcacaaggtgaacaacgtgatcggccaggcgctgctg
gcgcgccgcatgggcaagccgcgcgtgattgccgaaaccggcgccggccagcatggtgtc
gccaccgccacgattgctgcgcgctacggcatggaatgcgtcgtctacatgggcagcgaa
gacgtgcgccgccaggccgcgaacgtctaccgcatgaagctgctgggcgcgacggtggtg
ccagtggaatcgggatcgcgcacgcttaaggacgcgctgaacgaagcgatgcgcgactgg
gtgaccaacgtggccgacaccttctacatcatcggcacggtggcgggcccgcacccgtat
ccgatgatggtgcgcgacttccaggccgtgatcggcgaggaatgcaaggtgcagatgccc
gagatgaccggacgccagccggacgccgtgatcgcctgcgtgggcggcggctccaacgcc
atgggcatcttctatccgtacatcgatcatgccgacgtcaagctgatcggcgtggaagca
gcgggcgagggcatcgagaccggccgccacgccgcgtcgctcatgggtggctcaccgggc
gtgctgcacggtaaccgcacctatctgctgcaggatgaggatggccagatcatcgagacg
cattcgatttcggcggggctggactatccgggcgtcggtccggaacacgcctggttgaag
gatgtgcagcgcgcggaatacgtcggcattaccgacaaggaagcgctgcaatccttccat
gacctgtgccgcatggagggcatcatcccggcgctggaatcgagccatgcgctggcgtat
gcgtgcaagctggcgccgacgctgcccaaagacaagatcctgctcgtgaacctgtcgggc
cgcggcgacaaggacatgcataccgtcgcagaagtctccggcatccaactctaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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