KEGG   Ralstonia pickettii 12D: Rpic12D_2967
Entry
Rpic12D_2967      CDS       T00925                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
rpf  Ralstonia pickettii 12D
Pathway
rpf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Rpic12D_2967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rpf03021]
    Rpic12D_2967
   03400 DNA repair and recombination proteins [BR:rpf03400]
    Rpic12D_2967
Enzymes [BR:rpf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Rpic12D_2967
Transcription machinery [BR:rpf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Rpic12D_2967
DNA repair and recombination proteins [BR:rpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Rpic12D_2967
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: ACS64237
UniProt: C6BFW8
Position
1:complement(3122189..3126295)
AA seq 1368 aa
MAYSFTEKKRIRKSFAKRATVHQVPFLLATQIQSYAQFLQENTPVAQRKSEGLQAAFNAI
FPIVSHNGLARMEFVSYHLSNPPFDVKECQQRGLTFHSALRAKVRLIINDRENPTKVKEI
KEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARII
PYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDNFTLKTEGA
LMEFVPERLRGEVARFDISDKNGKVVVEKDKRINAKHIRDLDSAGTKLISVPEDYLLGRV
LAKNIVDPDTGEVLANANDELTEGVLEKLRDAGVKEIQTLYTNDLDQGPYMSATLRTDDT
ADQTAARIAIYRMMRPGEPPTEDAVEALFQRLFYSEDSYDLSRVGRMKVNSRLNRSTGTG
PMVLTDEDILDTIKLLVNLRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLSRVERAVK
ERLGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPG
GLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAQLNDYGFLETPYRKVEN
GKLTDQVDYLSAIEEGKYVVAQANATLDKDGNLIDELVSAREGSERETRMVTPDRVQYID
VAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRADKPLVGTGVERTVAVDSGT
AVQATRGGVVDYVDANRVVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPMVKVG
DIVARGDVIADGASTDMGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELSVVARDTKLGPEEITRDISNLAEAQLARLDESGITYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGVVRDKRAQSIIDEELK
RYRLDLNDQLRIVEGDAFQRLERLLVGKVANGGPKKLAKGTALTKEYLGDLDKWHWFDIR
PAEDEVALQLEAVKVAIEQKRHDFDLAFEEKRKKLTQGDELPPGVIKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKITPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGWAA
RGLGERIGNMLKAQAKAAEIRKLLEQIYNESGKVEDLDSLSDAEILELAENLKKGVPFAT
PVFDGAHEDEIRRMLDLAYPEDIAKEKGLTASKQQVTLFDGRTGEAFERPVTLGVMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENIVKGEHSIDAGMPESFNVLVKEIRSLGIDIDLERN
NT seq 4107 nt   +upstreamnt  +downstreamnt
atggcgtacagctttaccgagaaaaagcgtattcgcaagagtttcgcgaaacgcgcaacg
gttcatcaggttcccttcctgcttgccacccagattcaatcgtatgcccagttcttgcag
gagaacactcctgttgcacaacgcaagagcgaaggtttgcaagcggcgttcaacgccatt
ttccccatcgtgtcgcacaatggtctggcacgcatggagttcgtgtcgtaccacctgtcc
aacccgccgtttgacgtcaaggaatgtcaacagcgtggtctgaccttccactcggcgctg
cgcgcaaaagtgcgcttgatcatcaacgaccgcgagaatcccaccaaggtcaaggagatc
aaggagcaggaagtctacatgggcgaaattccgctcatgacctccaccggttcgttcgtg
atcaacgggacggaacgtgtgatcgtgtcccagctgcatcgttcgccgggcgtgttcttc
gagcacgacaagggcaagacgcacagctcgggcaagctgctgttctcggcgcggatcatt
ccgtaccgcggctcgtggctcgatttcgaattcgacccgaaggacatcctgtacttccgc
gtcgaccgccgccgcaagatgccggtgacgatcctgctgaagtcgattggcctgacgccg
gaacagatcctggcgcacttcttcgtgttcgataacttcacgctgaagaccgaaggcgca
ctgatggaattcgtgcccgagcgtctgcgcggtgaagtcgctcgcttcgacatttccgac
aagaacggcaaggtcgtggtcgagaaggacaagcgcatcaacgccaagcacatccgcgac
ctggattccgcgggcaccaagctgatcagcgtgccggaagactacctgctgggccgcgtg
ctggcgaagaacatcgtcgatccggacaccggtgaagtcctggccaacgccaacgacgaa
ctgaccgaaggcgtgctcgagaagctgcgtgatgccggcgtgaaggaaatccagacgctg
tacacgaacgacctggatcagggtccgtacatgtccgcgacgctgcgcacggacgacacg
gccgaccagaccgccgcgcgtatcgcgatctatcgcatgatgcgcccgggcgagccgccg
accgaagacgccgtcgaagcgctgttccaacgtctgttctacagcgaagactcgtacgac
ctgtcgcgcgttggccgcatgaaggtcaacagccgcctgaaccgctcgaccggtaccggc
ccgatggtgctgaccgacgaggacatcctcgacacgatcaagctgctggtgaatctgcgt
aacggcaagggcgaagtggacgatatcgaccacctcggcaaccgtcgcgtgcgttgcgtc
ggcgaactggcggaaaaccagttccgcgccggtctgtcgcgcgttgagcgtgccgtgaag
gaacgtctgggtcaggccgagacggaaaacctgatgccgcacgacctgatcaactcgaag
ccgatttcgtcagcgatccgcgagttcttcggttcgtcgcagctgtcgcagttcatggac
cagaccaacccgctgtcggaagtcacgcacaagcgtcgtatttcggcactgggcccgggc
ggtctgacgcgcgagcgtgcgggctttgaagtccgtgacgtgcacccgacccactatggc
cgcgtgtgcccgatcgaaacgccggaaggtccgaacattggtctgatcaactcgctggcg
ctgtacgcacagctgaacgactacggcttcctcgaaacgccgtaccgcaaggttgaaaac
ggcaagctgaccgaccaggtggattacctgtcggccatcgaggaaggcaagtacgtggtg
gcgcaggccaacgcgacgcttgacaaggacggcaacctgatcgacgagctggtttccgcg
cgcgaaggcagcgagcgtgaaacccgtatggtcacgccggaccgcgtgcagtacatcgac
gtggcaccgtcgcagatcgtgtcggctgcagcttcgctggtgccgttcctcgagcacgat
gatgcaaaccgtgcactgatgggcgcgaacatgcagcgtcaggccgtgccttgcctgcgt
gcagacaagccgctcgtgggtacgggcgtcgagcgcaccgtggcagtggactcgggtacc
gccgtgcaggcaacccgtggcggcgtggtcgactatgttgacgcgaaccgcgtggtgatc
cgcgtgaatgacgacgaagccgtggccggtgaagtcggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatggtcaaggtgggc
gacatcgttgcccgcggcgacgtgattgctgacggcgcctcgaccgacatgggcgagctt
gcgctcggccagaacatgctggtcgcgttcatgccctggaacggctacaacttcgaagat
tcgatcctgatctcggagcgcgtcgtggctgaagaccgctacacctcgatccacatcgag
gaactgtcggtcgtcgcccgcgacaccaagctcggaccggaagaaatcacgcgcgacatc
tcgaacctggccgaagcccaactggctcgcctggacgagtcgggcatcacgtacatcggc
gcggaagtggaagccggcgacgtgctggtcggcaaggtcacgcccaagggcgagacccag
ctgacgccggaagaaaagctgctgcgtgcgatcttcggtgagaaggcgtccgacgtgaag
gacacctcgctgcgcgtgccgtcgggcatgagcggtaccgtgatcgacgtgcaggtcttc
acgcgtgaaggcgtggtgcgtgacaagcgtgcccagtcgatcatcgacgaagagctgaag
cgctatcgcctggacctgaacgaccagctgcgtatcgtggaaggcgatgccttccagcgt
ctggagcgtctgctggtgggcaaggttgccaacggcggcccgaagaagctggccaagggc
accgcgctcacgaaggaatacctgggcgatctggacaagtggcactggttcgacatccgc
ccggcagaagacgaagtcgcgctgcagctggaagccgtgaaggttgccatcgagcagaag
cgccacgacttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgatcaagatggtcaaggtgtatctggccgtgaagcgtcgcctgcag
ccgggcgacaagatggccggccgtcacggtaacaagggtgttgtgtcgaagatcaccccg
atcgaagacatgccgtacatggccgacggcacacctgctgacatcgtgctgaacccgctg
ggcgtgccttcgcggatgaacgtgggtcagattctcgaaacccacctgggctgggccgcg
cgcggtctgggcgagcgcatcggcaacatgctcaaggcgcaagccaaggctgccgagatc
cgcaagctgctggagcagatctacaacgaaagcggcaaggttgaagatctggacagcctg
tccgacgctgaaatcctcgagctggccgagaacctgaagaagggcgtgccgttcgcgacg
ccggtgttcgatggtgcgcatgaggatgaaatccgccgcatgctggacctcgcctatccg
gaagacatcgcgaaggagaagggtctgaccgcttccaagcagcaggtcacgctgttcgac
ggtcgcaccggtgaagccttcgagcgtccggtcacgctgggcgtgatgcacatgctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgctcgaccggtccgtactcgctggtg
acgcagcagccgctgggcggtaaggcccagttcggtggccagcgtttcggtgaaatggaa
gtgtgggcactcgaagcgtacggcgcatcctacgtgctgcaggaaatgctgaccgtgaag
tcggatgacgtgaacggccggaccaaggtgtacgagaacatcgtcaagggcgagcactcg
atcgatgccggcatgccggaatcgttcaacgtgctggtgaaggaaatccgctcgctgggt
atcgacatcgacctcgagcgcaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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