KEGG   Ralstonia pickettii 12D: Rpic12D_3059
Entry
Rpic12D_3059      CDS       T00925                                 
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
rpf  Ralstonia pickettii 12D
Pathway
rpf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Rpic12D_3059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpf03400]
    Rpic12D_3059
Enzymes [BR:rpf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Rpic12D_3059
DNA repair and recombination proteins [BR:rpf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Rpic12D_3059
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Rpic12D_3059
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Rpic12D_3059
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: ACS64327
UniProt: C6BGH7
Position
1:complement(3232144..3233583)
AA seq 479 aa
MPATPSFLWHDYETFGAVPRRDRPAQFAGIRTDAELNEIGEPVELFCQPSNDWLPDPVSC
LITGITPQQCARQGIPEYRFAQAIERELGTPGTIGVGYNTIRFDDEVTRHLFWRNLIDPY
AREWQNECGRWDLLDVVRTTWALRPEGIQWPTHEDGRPSFKLEHLSKANGLVHEAAHDAV
SDVRATIALARLIRNAQPRLFDFCLALRKKDRVAAEIGDAPRPLLHISGMYGVERGCMAV
VWPLGGHPTNKNELIVWDLAFDPSELFDMDVATIRERMFTRAADLAEGTTRLPIKSIHIN
KSPIVISNMKTLQPGQAERWGIDFATIERHAAIAQGAPDMRETWRQVYARELEPIEDVDQ
NLYGGFVGNEDRRLLNELRTLSGEQLARLHAEFADARLPELLFRYRARNFPDTLNEEEYE
LWEQLRAERLFEGRDGYMTFETFGERLQQLGAEAEENGDTRAQTILQDLYDYAQQIVPG
NT seq 1440 nt   +upstreamnt  +downstreamnt
ttgcctgccactccctcctttctctggcacgactacgaaacgttcggtgccgtgccgcgc
cgtgatcgccccgcgcagtttgccggcatccgcaccgatgccgagctgaacgaaatcggc
gagccggtcgaactgttctgccagccttccaacgactggctgcccgatccggtatcgtgc
ctcatcaccggcatcacgccgcagcaatgcgcccggcaaggcattccggaataccgtttc
gcccaggctatcgagcgcgaactcggcacgcccggcaccatcggcgtcggctacaacacc
atccgcttcgacgatgaggtgacgcgccacctgttctggcgcaacctgatcgacccgtat
gctcgcgagtggcagaacgaatgtgggcgctgggatctgctcgacgtggtgcgcaccacc
tgggcgctgcgcccggaaggcattcaatggccgacccacgaagacggcaggcccagcttc
aagctggagcatctgtccaaggccaacggcctggtgcacgaggccgcgcacgatgcggtg
tccgacgtgcgcgcgacgatcgcgctggcgcgtctgattcgcaacgcgcagccgcgcctg
ttcgatttctgcctggcgctgcgcaagaaagaccgcgtggcggcggagattggcgatgcg
ccccgcccgttgctgcacatctccgggatgtacggcgtggagcgtggctgcatggccgtg
gtgtggccgctaggagggcacccgaccaacaagaacgaactgatcgtgtgggacctggcg
ttcgacccgtccgagctgttcgacatggacgtcgccacgatccgcgagcgcatgttcacg
cgcgcagccgatctggccgaaggcaccacgcgactgccgatcaagtcgatccacatcaac
aagtcgcccatcgtcatcagcaacatgaagacgctgcagcccgggcaggcagaacgctgg
ggcatcgacttcgccacgatcgaacgccacgccgccatcgcccagggcgcgcccgacatg
cgcgaaacatggcgccaggtgtacgcccgcgagttggagccgattgaagacgtcgaccag
aacctctacggcggattcgtcggcaacgaggatcgccgcctgctcaacgagctgcgcacg
ctcagcggcgaacagctcgcgcgcctgcatgcggagtttgccgacgcacgcctgccggag
ctgctgttccgctatcgcgcacgcaactttcccgatacgttgaacgaagaggaatacgaa
ctgtgggaacagcttcgcgccgagcggttgttcgaaggccgcgatggctacatgaccttt
gagaccttcggcgagcggcttcagcaattgggcgcggaagccgaggagaacggcgacacg
cgcgcgcagaccatcctgcaggatctgtacgactacgcgcagcagatcgtgcccggctga

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