KEGG   Ralstonia pickettii 12D: Rpic12D_3173
Entry
Rpic12D_3173      CDS       T00925                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rpf  Ralstonia pickettii 12D
Pathway
rpf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Rpic12D_3173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpf03400]
    Rpic12D_3173
Enzymes [BR:rpf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Rpic12D_3173
DNA repair and recombination proteins [BR:rpf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Rpic12D_3173
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII PriA_CRR Helicase_C Bac_DnaA ADDB_N zinc-ribbons_6 HypA AAA_16 CDC48_2 AAA_19
Other DBs
NCBI-ProteinID: ACS64440
UniProt: C6BH66
Position
1:complement(3353774..3356071)
AA seq 765 aa
MTTPQVDAAFSDAKVSASIVRVVIDTPLDAVFDYRCGQPVQPGQLVVVPFGNRRVAGLVV
ETAATTDVPQEKLRDVERVLDWVPPLDAEWRALAEFAAGYYHRALGEVMLPALPPLWRTP
GSWENLARQATETVYVMFEPARAALLDSIPKRASGAMRLAEALTGDGELSTSAAIELHGQ
AVAKLRDWATVGWLRAELRPKALLPQPLELPAPSVAPPLNDEQAAAVAAIAQAGAAGSFS
PFLLYGVTGSGKTEVYLHAIADALARDPAAQVLMLVPEINLTPQLEARIAARFPGVPMAA
LHSGLAEQPRALNWLAAHRGEARIVLGTRLAMLASLPNLALILVDEEHDTSYKQQEGLRY
SARDLALWRAKQRNIPVVLGSATPSLETWWRAEQTPTTRLTLSRRAQAEAVLPRVSLIDL
NLERRAGRQIRDGLSKPLVDAIADRLARGEQSLLFLNRRGYAPVLSCDACGWLSGCPRCS
AYLVLHKPERRLRCHHCGYESRIPHHCPDCGNVDIAPLGRGTQRIEETLGELFPQARVAR
IDADSTRRKGSAEALFDTVHEGSVDILIGTQMVAKGHDFQRVTLVGVVAPDSSLFSHDFR
AGEHLFASLMQVAGRAGRAGLAGEVLIQTRYPDAPALQALVRHDYDGFARQLLRERKQAG
LPPFAYQALLTAEHKEVARALEFLSAARSAGEALAAELGAPVFLHDPVPMTMVRLANRER
AQLLVESGSRAALQKLLTAWTEGFAGIGKTVKGVRWQLEIDPLRI
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgaccacgccccaagtcgacgccgcgttttctgatgccaaggtgtcggcctccattgtt
cgcgtggtgattgatacgccgctcgatgcggtgttcgattaccggtgtgggcagcctgtg
cagcctgggcaattggttgtggtgccgtttggcaaccggcgagtggcggggttagtcgtc
gaaaccgccgcgaccaccgatgtgccgcaagaaaagctgcgcgatgtcgagcgggtgctc
gactgggtgccgccgctcgacgccgaatggcgggccctggccgaatttgctgccggctac
tatcaccgcgcgctcggtgaagtgatgttaccggcgctcccgccgctgtggcgaaccccg
ggcagttgggaaaacctcgcccggcaggccaccgaaaccgtctacgtgatgtttgaaccc
gcccgggcagcgttgctggacagcattccgaaacgtgcgtccggcgccatgcgattggcc
gaagcgctgaccggcgatggcgagttatccaccagcgcggccatcgagctgcacgggcaa
gccgttgccaagctgcgcgattgggccaccgtcggctggctgcgcgcagaactgcgtccg
aaggcgctgctgccgcaaccgctcgaactcccggcgccttccgtcgcgccccccttgaac
gatgagcaggccgccgccgtggcagccattgcccaagctggcgcggctggctccttcagc
ccgttcctgttgtacggcgtgaccggcagcggcaagaccgaggtctacctgcacgccatc
gccgatgcgctggcgcgggaccctgcggcccaggtgctgatgctggtgcccgagatcaac
ctgacgccgcagctggaagcacgcatcgccgcacgttttccgggcgtgcccatggcggcg
ctgcacagcggcctggccgaacagccgcgcgcgttgaactggctcgccgcgcatcgcggt
gaggcgcgcatcgtgctcggcacgcggctggcgatgctggcgtcgttgcccaacctcgcg
ctcatcctcgtcgacgaagaacacgacacgtcgtacaagcagcaggaaggcctgcgctat
tccgcacgggatttggcgctatggcgtgccaagcagcgcaacatccccgtggtgctgggc
tcggccacgccgtccctggaaacgtggtggcgcgcggagcagacgcccaccacgcgcctg
acgctctcgcggcgcgcgcaggccgaagcggtgctgccgcgcgtgtcgctcatcgacctg
aatctggagcgccgcgccgggcgccagattcgcgatggcctgtccaaaccactcgtcgac
gcgattgccgatcgcctggcgcgcggcgaacagagcctgctgttcctcaaccgccgcggc
tacgcgcccgtgctgtcctgcgacgcgtgcggctggctgtcgggctgcccgcgttgctca
gcgtacctggtgctgcacaagcccgagcggcgcctgcgctgccaccactgcgggtacgaa
tcgcgcatcccgcatcattgcccggactgcggcaacgtcgacatcgccccgctcgggcgt
ggcacccagcgcatcgaagagacgctcggcgagctgttcccgcaggcccgcgtcgcccgc
atcgacgccgattcaacccgccgcaagggcagcgccgaagcgctgttcgacaccgtgcac
gaaggcagcgtcgacatcctgatcggcacgcagatggtcgccaaggggcacgacttccag
cgcgtgacgctggtcggcgtggtcgcgcccgattcctcgctgttttcgcacgacttccgg
gccggagagcatctgtttgcctcgctgatgcaggtggccggccgcgcgggccgggcgggc
ctggcgggcgaggtgctgattcagacgcggtatccggatgccccggcgctgcaggcgctg
gttcgacatgactacgatggtttcgcgcgccagttgctgcgggaacgcaagcaagccggg
ctgccgccgtttgcctatcaagccctgctcaccgccgagcacaaggaagtcgcgagggcg
cttgaattcttgagcgctgcgcgctcggcaggtgaagccttggctgctgaattgggcgcg
ccagtgttcttgcatgacccggtgccgatgacgatggtgcggctggccaaccgcgagcgc
gcgcagttgctggtggaatcgggttctcgggcggctttgcagaagcttttgacggcttgg
actgaggggtttgcggggatcggcaagaccgtgaagggggtgcggtggcagttggagatc
gatcctttgaggatttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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