KEGG T00925: Rpic12D

Ralstonia pickettii 12D: Rpic12D_4087

Entry

Rpic12D_4087 CDS T00925

Definition

AMP-dependent synthetase and ligase

Orthology

K01895

acetyl-CoA synthetase [EC:6.2.1.1]

Organism

rpf Ralstonia pickettii 12D

Pathway

rpf00010	Glycolysis / Gluconeogenesis
rpf00620	Pyruvate metabolism
rpf00640	Propanoate metabolism
rpf00680	Methane metabolism
rpf01100	Metabolic pathways
rpf01110	Biosynthesis of secondary metabolites
rpf01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:rpf00010]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:rpf00620]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:rpf00640]
Metabolism; Energy metabolism; Methane metabolism [PATH:rpf00680]

SSDB

Motif

Pfam:

AMP-binding AMP-binding_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2:680986..682680

AA seq 564 aa
MNEAVSAAQGFVEARDFLLRHRTDYDRAYREFAWPKLDTFNWALDYFDVMARGNDNPALW
IVDDAQGEGLKLSFAQMSERSSCMANFLRGLGMVRGDRLLLMLPNRVELWDVMLAAMKLG
AVVLPATTQLSPDDVRDRVELGGATCVVVDAAELHKFESVDASVKRIAVGAQRDGWIDLA
AAYDAPAEFVPDGPTKATDPLLLYFTSGTTSKPKLVEHTHQSYPVGHLSTMYWIGLQPGD
IHWNISSPGWAKHAWSCFFAPWNAQACVFVYNYARFVPKDTLDVLVRFNVTTLCAPPTVW
RMLVQEPLATYAVKLREIVGAGEPLNPEIIERVRSAWGVTIRDGFGQTETTCQIGNTPGQ
PVVPGSVGRPLPGYRVELVDHDDQPASEGEIVLPLSHRPLGLMQGYANNAKATAEAMRNG
YYHTSDVAMRRDDGYFVYVGRTDDVFKSSDYRLSPFELESVLIEHEAIAEAAVVPSSDPL
RLSVPKAFVTVRQGYEAGPELARAVFLFSREKLAPYKRIRRLQFSELPKTISGKIRRVEL
RRLELERTPQPARLPGEYWEEDFA

NT seq 1695 nt +upstreamnt +downstreamnt
atgaacgaagcggtatctgcagcacagggttttgtggaagcgcgcgattttctgctgcgc
catcgcaccgactacgaccgcgcgtatcgcgagttcgcgtggccgaagctggacacgttc
aactgggcgctcgactacttcgatgtgatggcgcgcggcaacgataacccggcgctgtgg
atcgtcgatgacgcgcagggcgaagggttgaagctgtcgtttgcgcagatgtcggagcgc
tcgtcgtgcatggcgaacttcctgcgcgggcttggcatggtgcgtggtgaccgtctgctg
ctgatgctgccgaaccgcgtcgaactgtgggacgtgatgctcgcggcgatgaagctcggt
gcggtggtgctgccggctacgacgcagctttcgccggatgacgtgcgcgaccgcgttgaa
ctgggcggcgcgacatgcgtggttgttgatgcggcagagttgcacaaattcgagagtgtt
gatgcgagtgtcaagcgcatcgccgtgggcgcgcagcgcgatggctggatcgacctggca
gcggcttacgacgcgcccgcggagttcgtgcccgacggcccgaccaaggcgaccgacccg
ctgctgctgtacttcacctcgggcaccacgtccaagccgaagctcgtcgaacacacgcac
cagagctatccggtcggacacctgtcgaccatgtactggatcggcctgcaacccggcgac
atccactggaacatcagctcacccggctgggcgaaacacgcgtggagttgcttctttgcc
ccgtggaacgcgcaggcctgcgtcttcgtttacaactacgcgcgcttcgtgccgaaggac
acgctggacgtgctggtgcgctttaacgtgaccacgctgtgcgcgccgcccaccgtgtgg
cgcatgctggtgcaggagccgctggccacctacgccgtcaagctgcgcgagatcgtcggt
gcgggcgagccgctgaaccccgagatcatcgagcgcgtgcgcagcgcctggggcgtgacc
attcgcgacggctttggccagaccgagaccacctgccagatcggcaacacgccgggccag
ccggtcgtgccgggctcggtcgggcgcccgctgcccggctaccgcgtggagctggtcgac
cacgacgatcagcccgccagcgaaggcgagatcgtgctgccgctctcgcaccgcccgctc
gggttgatgcagggctatgccaacaacgccaaagccacggccgaggcgatgcgcaacggc
tattaccacacctccgacgtcgcgatgcggcgcgacgacggctacttcgtctatgtgggc
cgcaccgacgacgtgtttaagtcgtccgactaccgcctgagccccttcgagctggaaagc
gtgctgatcgagcacgaagccattgccgaggccgccgtggtgccgagttccgatccgctg
cgcctgtcggtgcccaaggcattcgtgacggtgcgccagggctatgaggctggccctgaa
ctggcccgggccgtgttcctgttctcgcgcgaaaagctggcgccctacaaacgcatccgc
cggctgcagttcagcgagctgcccaagaccatctccggaaagatccggcgcgtggaactg
cgtcggctggagcttgaacgcacgccgcaaccggctcgcctgcctggcgagtactgggaa
gaagactttgcctga

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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