KEGG   Rhizobium phaseoli: AMC79_CH00012
Entry
AMC79_CH00012     CDS       T04590                                 
Symbol
gyrB-1
Name
(GenBank) DNA gyrase subunit B 1
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rpha  Rhizobium phaseoli
Brite
KEGG Orthology (KO) [BR:rpha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpha03032]
    AMC79_CH00012 (gyrB-1)
   03400 DNA repair and recombination proteins [BR:rpha03400]
    AMC79_CH00012 (gyrB-1)
Enzymes [BR:rpha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AMC79_CH00012 (gyrB-1)
DNA replication proteins [BR:rpha03032]
 Prokaryotic type
  DNA Topoisomerases
   AMC79_CH00012 (gyrB-1)
DNA repair and recombination proteins [BR:rpha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AMC79_CH00012 (gyrB-1)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: ANL95874
Position
8268..10769
AA seq 833 aa
MKKAGDSQSLPPLYDNRENLDRMSDTSATENGVSTEYGADSIKVLKGLDAVRKRPGMYIG
DTDDGSGLHHMVYEVVDNAIDEALAGHADIVTVSLNPDGSVTVTDNGRGIPTDIHSGEGV
SAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSVWLKLKIRRHGKIHEMSFTHG
VADAPLKVTGDAPDATGTEVSFMPSSETFTMTEFDYGTLEHRLRELAFLNSGVRILLSDK
RHSDIKQEEMRYDGGLEAFVAYLDRAKKPLVDKPVAIRGEKDGITVEVAMWWNDSYHENV
LCFTNNIPQRDGGTHMAGFRAALTRQVVSYADNSGITKKEKVTLQGEDCREGLTAVLSVK
VPDPKFSSQTKDKLVSSEVRPVVESLVNEALSTWFEEHPSEAKILVGKVVEAAAAREAAR
KARELTRRKGALDIASLPGKLADCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPL
RGKILNVERARFDKMLSSQEIGTLITALGTGIGKDEFNAEKLRYHKIIIMTDADVDGAHI
RTLLLTFFFRQMPELIERGHLYIAQPPLYKVARGKSVQYLKDEKALEEYLIGQGLEDAAL
RLGSGEVRTGQDLREVILDALRMRALLDNLHSRYNRAVVEQAAIAGALNAELVSDAARAR
ALANEVASRLDIIAEETERGWQGDLTSDGGLRLERMVRGVKEIVVLDMALIGSSDARHID
QLTSRLKEIYQTPPSLHRREGDIEISGPRALLDAIFASGRKGLTMQRYKGLGEMNAEQLW
ETTLDPNVRSLLQVKVADATDADGLFARLMGDEVEPRREFIQDNALSVANLDI
NT seq 2502 nt   +upstreamnt  +downstreamnt
gtgaagaaagccggtgattcgcaaagcctgccgccgctttacgacaatagggaaaatctc
gacagaatgagcgatacatccgcgacggaaaacggcgtaagcaccgaatatggcgcagat
tccatcaaggtcctgaagggcctcgatgctgtgcgcaaacgccccggcatgtatatcggc
gataccgacgacggctccggccttcaccacatggtctatgaagtcgtcgacaacgcgatc
gacgaagcgttggccggtcacgccgacatcgtcaccgtcagcctcaatccggatggctcg
gtgacggtcaccgataacggccgcggcatcccgaccgacatccacagcggcgagggcgtg
tcggcggccgaagtgatcatgacgcagttgcatgccggcggtaaattcgaccagaattcc
tacaaggtttccggcggtctgcacggcgtcggcgtttccgtcgtcaacgcgctttccgtc
tggctgaagctgaagatccgccgccatggcaagatccatgaaatgagcttcacccatggc
gtggctgacgcgccgctgaaggtcaccggcgacgccccggatgcgaccggcacagaagtg
agcttcatgccgagcagcgaaaccttcaccatgaccgaattcgactacggcacgctggag
catcgcctgcgcgaacttgccttcctgaattccggcgtacgcatcctgctgagcgacaag
cgccattccgatatcaagcaggaagagatgcgctatgacggcggcctcgaggccttcgtc
gcctatctcgaccgcgccaagaagccgctcgtcgacaagccggtcgccatccgcggcgaa
aaggacggcatcaccgtcgaagtcgcgatgtggtggaacgacagctaccacgagaacgtg
ctctgcttcaccaacaacattccccagcgcgacggcggcacgcatatggccggtttccgc
gcggccttgacgcgccaggtcgtgtcctatgccgacaattccggcatcaccaaaaaggaa
aaggtgacgctgcagggcgaagattgccgcgaaggtctgacggctgttctgtcggtcaag
gtgcccgatccgaaattctcctcgcagaccaaggacaagctcgtttcctcggaagtccgt
cctgttgtcgaaagtctcgtcaacgaggcactgagcacctggttcgaggagcatccgagt
gaagccaagatcctcgtcggcaaggtcgtcgaggcggcagccgcacgcgaggcagctcgc
aaggcccgcgaattgacccgccgcaagggcgcgctcgatatcgcctcgctgcccggcaag
ctggccgactgctccgagcgcgatccggccaaatccgaagttttcctggtcgagggcgat
tccgccggcggctcggccaagcagggccgttcgcgcgaaaaccaggcgatcctgccgctg
cgcggcaagatcctcaacgtcgaacgcgcccgtttcgacaagatgctgtcgagccaggaa
atcggcacgctgatcaccgcgctcggcaccggcatcggcaaggacgagttcaatgccgaa
aagctgcgttatcacaagatcatcatcatgacggacgccgatgtcgatggcgcccatatc
cgcacgctgctgctcaccttcttcttccgtcagatgccggagctgatcgagcgcggccat
ctctatatcgctcagccgccgctctataaggtcgcgcgcggcaagtcggtgcagtatctg
aaggacgaaaaggcgctcgaggaatatctgattggccagggtctggaggatgccgccctg
aggctcggcagcggcgaggtccgcaccggccaggatctgcgcgaggtcattctcgacgca
ctgcgcatgcgcgctctgctcgacaatctgcattcgcgttacaatcgcgccgttgtcgaa
caggcggcgattgccggtgcgcttaacgccgaactcgtcagcgacgctgcaagggcgcgg
gcattggcaaacgaagtcgcaagccgtctcgatatcatcgccgaggaaaccgaacgcggc
tggcagggcgatctgaccagcgatggcggcctccgtcttgaacgcatggtccgcggcgtc
aaggaaatcgtcgtgctcgacatggcgttgatcggctcttccgatgcccggcacatcgat
cagctgacgtcacgactcaaggaaatctatcagacgccgccgtcgctgcatcggcgcgaa
ggcgacatcgagatttcgggaccgcgtgccctacttgacgccattttcgccagcggccgc
aagggccttaccatgcagcgctacaaggggctgggcgagatgaatgccgaacagctctgg
gaaacgaccctcgatccgaacgtccgctcgctgctgcaggtcaaggtcgcggacgccacc
gatgccgacggcctgttcgcccgcctgatgggtgacgaggtcgagccgcggcgcgaattc
atccaggacaacgcgctgagcgtcgcaaacctcgatatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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