KEGG   Ralstonia pickettii 12J: Rpic_0254Help
Entry
Rpic_0254         CDS       T00762                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rpi  Ralstonia pickettii 12J
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rpi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rpic_0254
Enzymes [BR:rpi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rpic_0254
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rpic_0254
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:268808..269683
Genome map
AA seq 291 aa AA seqDB search
MPELPEVEVTRLGLLPHITGRRIVRAVVRHHGLRWPVDPALPELLAGLTVTRLLRRGKYL
LIECVPEVEQSGRAADTVGGWLLIHLGMTGTLRVLETPVPPGLHDHVDIELAGATGVHVT
LRYRDPRRFGAVLWHAGDEAGLAEHPLLRNLGIEPFDARFDGDWMFARTRGRRVAIKSAL
LAGDIVVGVGNIYCSESLFRAGIRPTTAAGRISRPRYAALADAIRATLADAIARGGSTLR
DFVGSDGQSGYFQLEAFVYDRAGLPCRACGTPIRQIVQGQRSTFCCPTCQR
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttgccggaggtcgaggtcactcgcctgggcttgctaccgcatattactggg
cgacgtatcgtgcgcgccgtggtgcgccatcacggcttgcgctggcccgtcgatccggcg
ctgccggagttgctcgctggcctgaccgttacgcgtctgctgcgccggggcaaatacctg
ctcatcgaatgcgtgcccgaggtggagcagtccggccgcgccgccgatactgtggggggc
tggctgctcatccatcttgggatgacgggcaccttgcgcgtgctggaaacgcccgtgccg
ccaggcctgcacgatcacgtcgatatcgaactcgccggcgcaactggcgtacacgtcaca
ctgcgctatcgcgacccgcgccggtttggtgccgtgctttggcatgcaggcgatgaagcc
ggcttggccgaacacccgctgctgcgcaacctcggcatcgagccgttcgacgcgcgattc
gacggcgactggatgtttgcccgcacgcgcgggcgccgggtggccatcaagtcggcgctg
ctggccggcgacatcgtggtcggcgtgggcaatatctattgttcggagagcctgtttcgc
gccggtatccggccgactacggcggcgggccgcatcagccggccacgctatgcggcgttg
gccgatgccattcgtgccaccttggccgatgccatcgcgcgtgggggcagcacgctgcgc
gactttgtcggctcggacggacaaagcggctacttccagcttgaagccttcgtgtacgac
cgcgccggtctgccgtgccgcgcgtgcggcactccgatccgccagatcgtgcagggccag
cgctccacgttctgttgcccgacctgccagcgctga

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