KEGG T00762: Rpic

Ralstonia pickettii 12J: Rpic_0536

Entry

Rpic_0536 CDS T00762

Definition

Cache sensor-containing methyl-accepting chemotaxis sensory transducer

Orthology

K03406

methyl-accepting chemotaxis protein

Organism

rpi Ralstonia pickettii 12J

Pathway

rpi02020	Two-component system
rpi02030	Bacterial chemotaxis

Class

Environmental Information Processing; Signal transduction; Two-component system [PATH:rpi02020]
Cellular Processes; Cell motility; Bacterial chemotaxis [PATH:rpi02030]

SSDB

Motif

Pfam:

MCPsignal Cache_1 HAMP UPF0149 DUF1664 DUF1395 EAP30 Laminin_II

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:572030..573859

AA seq 609 aa
MGVVVGNHTVLASIRTRILLTCVAIVVGALTFAGGLNYLVTRSYNDESIRQNLQSVARGH
IAGIDDWVASKTQMMVSLQDVAVSADPIPVFKAVHKAGGFINVYVGYPDKSYKFSNPEGI
PPTYDPTARPWYKQAVEAGKPVVTPPYVSASTGQLVVTFAVPILEGGALKGVIGGDVAMD
SVIANVKAIHPTQASFGFLVNAAGKIVAHPNDKLTLKPATELAAGLNEATLASLAQAERP
VEVTVDGASKLLYRQGVKGTDWGLVVALDKSDATAGMRSLVMTSIGALVGVAIVAALIVG
AMTARAFRRLSMIRDAMDDIGSGSGDLTKRLPSDGEDEVAQIARSFNAFADKLTAVMQQI
RLGSDSVRSAAQEIAAGNADLSQRTEEQASSLEETASSMEELTSIVKQNADNARQASQLA
VTASDVATRGGNVVGQVVQTMGGINESSKKIADIIGVIESIAFQTNILALNAAVEAARAG
EQGRGFAVVASEVRSLAQRSAGAAKEIKALISDSVDRVSNGTALVDQAGVTMAEIVDAVK
RVTDIMGEISSASEEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAAESLEEQAHNLNE
AVGQFRLSH

NT seq 1830 nt +upstreamnt +downstreamnt
atgggcgtcgtagtaggaaaccataccgtgcttgcatccatccgtactcgcattttgctg
acctgcgttgccatcgtggtcggcgcattgacctttgccggcggtctcaactatctcgtg
acgcgctcgtacaacgacgagtccatccgccagaacctgcagtccgtcgcgcggggccac
atcgctggcatcgacgactgggtggcgtccaagacgcagatgatggtgtcgctgcaagac
gtggcggtgtctgccgatccgattccggtcttcaaggccgtgcacaaggctggcggcttc
attaacgtctatgttggctatcccgacaagtcgtacaaattctcgaaccccgaaggcatt
ccgccgacgtatgacccgaccgcgcgcccctggtacaagcaggcggtggaggcgggcaag
cctgtggtgacgccgccgtacgtgagcgccagcaccggccagctcgtggtgactttcgca
gtgcccattctggaaggcggcgcgctcaagggcgtgattggcggcgacgtggcaatggac
agcgtgatcgccaacgtgaaggccatccatccgacgcaggcgagcttcggtttcctcgtc
aacgctgcgggcaagatcgttgcgcacccgaatgacaaactcacgctcaaaccggcaact
gagctggcggcagggttgaacgaagccacactggcatcgctggcacaagccgagaggccc
gtggaagtgacggtggatggggcgtccaagctgctctaccgccagggcgtgaagggcacc
gactggggcctggtggtggcgctggacaagtctgacgccaccgcgggtatgcgctcgctg
gtgatgacgtcgattggcgcgctggtgggcgtggccatcgttgcagcactcatcgtcggt
gcaatgacggcacgcgcgttccgccgcctgtcgatgatccgtgatgcaatggacgacatc
ggctcgggcagcggcgacctcaccaagcgtctgccgtcggacggcgaagacgaagtcgcg
cagatcgcccgttcgttcaatgcgtttgccgacaagctcacggcggtgatgcagcagatc
cgcctgggcagcgattcggtgcgctcggccgcgcaggaaattgccgccggcaacgcagac
ctgtcgcagcgcacggaagagcaggccagctcgctggaagaaaccgcgtcgagcatggaa
gaactgacgagtatcgtgaagcagaacgccgacaacgcgcgtcaggccagccagcttgcc
gtcacggcgtcggacgtggccacgcgcggcggcaacgtggtcggccaggttgtgcagacc
atgggcggcatcaacgagagcagcaagaagattgccgacatcatcggcgtgatcgaaagc
atcgccttccagaccaacatcctggcgctgaacgcggcggtggaagccgcgcgtgccggc
gagcagggccgcggctttgccgtggtggccagcgaagtgcgcagcctggcgcagcgttcg
gccggtgcggccaaggaaatcaaggcgctgatcagcgactcggtggatcgtgtgagcaac
ggcacggcgctggtggatcaggccggcgtgacgatggccgagatcgtggatgcagtgaag
cgcgtgaccgacatcatgggcgagatttcatcagcgtcggaagagcagagcagcggcatc
gagcaggtcaaccaggccgtcaaccagatggaccaggtgacgcagcagaacgccgcgctg
gtcgagcaggcggctgccgctgcggaatcgctggaggaacaggcccacaacctgaacgag
gcagtggggcagttccgcttgtcgcactaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF

DBGET integrated database retrieval system