KEGG   Ralstonia pickettii 12J: Rpic_0905
Entry
Rpic_0905         CDS       T00762                                 
Name
(GenBank) ribonuclease, Rne/Rng family
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
rpi  Ralstonia pickettii 12J
Pathway
rpi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rpic_0905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpi03019]
    Rpic_0905
   03009 Ribosome biogenesis [BR:rpi03009]
    Rpic_0905
Enzymes [BR:rpi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     Rpic_0905
Messenger RNA biogenesis [BR:rpi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Rpic_0905
Ribosome biogenesis [BR:rpi03009]
 Prokaryotic type
  rRNA processing factors
   Rpic_0905
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: ACD26055
UniProt: B2U958
Position
1:complement(958631..961666)
AA seq 1011 aa
MKRMLFNATQQEELRVAIVDGQKLIDIDIETAGREQRKGNIYKGVITRIEPSLEACFVNY
GEERHGFLPFKEVARAYFKDGVDVRGARIQDALSEGQELIVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGEDRQELRETMAQLEVPDGMSIIARTAGIGRSAEELQ
WDLNYLMQLWKAVDGAAVDNKAPLLIYLESSLVIRAIRDYFQPDIGEILIDTDDIYDQAR
AFMSVVMPDNMNRVKKYRDDVPLFSRFQIEHQIESAYSRMVMLPSGGAIVIDHTEALVAI
DVNSARATKGADIEETAARTNLEAADEIARQLRLRDLGGLIVIDFIDMESSKAQKDVETR
LKDALRHDRARVQMGKISRFGLMELSRQRLRPSLSEGSHVTCPRCNGTGHIRDTESSALQ
VLRIIQEEAMKENTAAIHCQVPVEVAAFLLNEKRPDINLIETRFKVNVLLIPNKHLETPH
YKLERLRHDDPRLDDDKASYKMAEEAAKELEADTAYSTRKETAKPRQEAAVKGITPDQPA
PVSVPRAERPVRTEAAPAPQAPAPAPVPAQGGFVSWLKSLFGAKPAEPVVAAPVETPKQR
AEEGNRQGRGNRQDRGGRGQRGERGERQGQGQNGRDGSRQGRERNEAREGQQQVQREGQR
DGQRGNRDRNRQPAQVEGAVRETAEARQPQQGQEVRTEGQNQGQGRRERNQERRERQPRE
GREAREGREPREPRENREPRENRGERDAQAKEAASLAAEGLIDQTAASQVPQPLLDTAAP
VEGIEGEGVTPGAEVNGEGEERRRRGRRGRNRYRRDREGAEGVRAEGEGEGENEGAESAD
EAVADMHAEPVLPATVAEPVQTTSFAPVENPAPVVQEPVHAAEAVAPVSALPQVQPTEPA
LAAAIAAPAAEVEAEAPQEAIVTAFAEVPAPVSTIAKASPLPIETLQSVLDNAGMTWVHT
DSQKLRASQEEAARTVTAPRVPRERKPLPPVQHGPMVLVETHRPAGGADQQ
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgaaacgcatgttgttcaatgcgacgcagcaagaagaattgcgcgtcgccattgtcgat
ggtcagaaactgatcgacatcgacatcgaaaccgccgggcgcgagcagcgcaaaggcaat
atctacaagggtgtcatcacccgcatcgaaccgtcgctggaagcgtgcttcgtcaactac
ggcgaagagcggcacggttttctccccttcaaggaagtcgcccgcgcctatttcaaggac
ggtgtggacgtgcgcggcgcgcgcatccaggatgccctgtctgaaggccaggagctgatc
gtccaggttgaaaaggaagaacgcggcaacaagggagcagccctgaccacgttcatctcg
ctggctggccgctacctcgtgctgatgccgaacaacccgcgcggcggcggcgtgtcgcgc
cgcatcgagggcgaggaccgccaggaactgcgcgagacgatggcgcaactggaagtgccg
gacggcatgagcatcatcgcccgcaccgccggcattggccgctcggccgaagagctgcag
tgggacttgaactacctgatgcagctgtggaaagccgtcgatggtgccgccgtcgacaac
aaagccccgctgctgatctatctcgaatccagcctggtgatccgcgccatccgcgattac
ttccagccggatatcggcgaaatcctgatcgatacggacgacatctacgatcaggcccgc
gccttcatgagcgtggtgatgcccgacaacatgaatcgggtgaagaagtaccgcgacgac
gttcccctgttctcgcgcttccagatcgaacaccagattgaatcagcgtactcgcgcatg
gtcatgctgccctcgggcggcgccattgtgattgaccacaccgaggcgctcgtcgccatt
gacgtgaactcagcgcgcgctaccaagggcgccgatatcgaagaaaccgccgcgcgcacc
aaccttgaggctgccgacgaaatcgctcgccagctccgcctgcgtgacctcggcggcctg
atcgtgatcgacttcatcgacatggagtcgagcaaggcgcagaaggatgtcgaaacccgc
ctgaaagacgcgctgcgtcacgaccgcgcccgggtgcaaatgggcaagatcagccgcttc
ggcctgatggagctgtcgcgccagcgcctgcgtccgtcgctgtcggaaggctcgcacgtc
acttgcccacgctgtaacggcacggggcatatccgcgataccgaatcgtccgccctgcag
gtgctgcgcatcatccaggaagaggcgatgaaggaaaacaccgccgcgatccactgccag
gtgccggtggaagtggctgcgttccttctcaacgagaagcgcccggacatcaacctgatc
gagacgcgcttcaaggtcaacgtgctgctgattccgaacaagcatctggagacgccgcac
tacaagctggaacgcctgcgccacgacgatccgcgcctggacgacgacaaggccagctat
aagatggccgaagaggccgccaaggagctggaagccgacaccgcttacagcacccgcaag
gaaactgccaagccgcgccaggaagctgccgtcaagggcatcacgccggaccaaccggca
cccgtgtcggtgccgcgcgctgagcgtccggttcgtactgaagccgctccggcaccgcaa
gcgccggccccggctccggtccctgcccaaggtggttttgtctcgtggctgaaatcgctg
tttggcgccaaaccggccgagccggtggtggctgcgccggtcgaaacgccgaagcaacga
gctgaagaaggcaaccgccaaggccgcggcaatcgccaggaccgtggtggccgaggccag
cgtggcgaacgtggcgagcgccaaggtcaaggccagaacggccgcgatggcagccgccag
ggccgtgagcgcaacgaagcccgcgaaggtcagcaacaagtccagcgcgaaggtcaacgt
gacggtcagcgcggcaaccgcgatcgcaaccgccagccggcccaggtcgaaggcgctgtc
cgcgagacggctgaagcgcgccagccgcagcaaggtcaggaggttcgcaccgagggccag
aaccagggccaaggccgccgggagcgcaaccaggaacgtcgcgagcgccaaccgcgtgaa
ggccgagaagcccgcgaaggtcgtgaaccgcgcgagccgcgtgaaaaccgtgagccgcgc
gaaaaccgtggcgagcgcgacgcacaagccaaggaagccgcttccctggctgccgaaggc
ctgatcgaccagaccgccgcatcgcaagtgccgcaaccgctgctcgacaccgctgctccg
gtagaaggcatcgagggcgaaggcgtgacgccgggcgcggaagtcaacggtgaaggcgaa
gagcgccgtcgtcgtgggcgccgtggccgcaaccgctatcgccgtgaccgcgagggcgcg
gaaggcgtccgtgcggaaggtgaaggtgaaggcgaaaacgaaggcgccgaaagcgcagac
gaagccgtcgccgacatgcatgccgagccggtgctgcccgcaaccgtggcggaacctgtg
cagacgacgtcgtttgcaccggttgagaacccggctccggtggtgcaggaaccggtgcat
gctgcggaagccgtggcccctgtgtcggccctgccgcaagtgcaaccgacggagcccgcc
cttgcagccgctatcgcagcgcccgcagcggaagtcgaagcggaagcgcctcaagaggcc
atcgtgacggcatttgcggaagtgccggctccggtcagcacgatcgccaaggcttcgccg
ctgccgatcgagacgctgcagagcgtgctggacaatgccggaatgacgtgggtccacact
gacagtcagaagctgcgcgcctcgcaggaagaggctgcacgcaccgttacggcaccgcgt
gtgccgcgcgagcgcaaaccgctgccgccggtccagcacggcccgatggttctggtcgag
acccaccgtccggcgggtggcgcagaccagcagtaa

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