KEGG   Pararhodospirillum photometricum: RSPPHO_01246
Entry
RSPPHO_01246      CDS       T01851                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rpm  Pararhodospirillum photometricum
Pathway
rpm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rpm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RSPPHO_01246 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rpm03021]
    RSPPHO_01246 (rpoA)
   03400 DNA repair and recombination proteins [BR:rpm03400]
    RSPPHO_01246 (rpoA)
Enzymes [BR:rpm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RSPPHO_01246 (rpoA)
Transcription machinery [BR:rpm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RSPPHO_01246 (rpoA)
DNA repair and recombination proteins [BR:rpm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RSPPHO_01246 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L IDH
Other DBs
NCBI-ProteinID: CCG07872
UniProt: H6SSJ3
Position
1519975..1521081
AA seq 368 aa
MFADRRGSRRRARKNLVLSADPDVQEAAMSLIQKNWQELIKPSKLNIEPVGGSKMIATVV
AEPLERGFGLTLGNALRRVLLSSLQGAAVTAIQIDGVLHEFSSIPGVREDVTDVILNIKD
LALRMHVEGPRRMSLKASGPGEVTAAQIETGPDIEIMNPGLVICHLDEGATLSMEFTVGM
GKGYVPSTQNRPEDAPIGYIPIDSIFSPVRKVSYKVDNSRVGQVTDYDKLSMVVETDGSV
SPEDAVALAARILQDQLQLFINFEEPQLTSEEKREDELPFNKNLLRKVDELELSVRSANC
LKNDNIIYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEIPNWPPENIEDL
AKKLEEHY
NT seq 1107 nt   +upstreamnt  +downstreamnt
ttgtttgcggatcgccggggttcccggcgccgggcgagaaagaatctcgtcctctccgcc
gaccccgatgttcaggaagccgcgatgtccttgatccagaaaaattggcaagaactgatc
aagccctccaagctcaatattgagcccgtgggcggatcgaaaatgatcgccaccgtggtg
gccgagccgctggagcggggattcggcttgacgctcggcaatgccttgcgccgggtgttg
ttgtcgtccctccagggcgcggcagtgaccgccattcagatcgatggtgttctgcacgaa
ttctcgtctatccctggcgtgcgtgaagacgtgaccgacgtgatcttgaatatcaaggat
ctcgcgttgcgtatgcatgtcgaggggccgcggcgcatgagcctcaaggcctccgggccg
ggcgaggtcaccgccgcccagatcgagaccgggccggatatcgagatcatgaatcccggg
ctcgtcatttgtcacctggacgagggtgcgaccctgtccatggaatttacggtggggatg
ggcaaggggtatgtgccctcgacccagaaccgtcccgaggatgcgccgatcgggtatatc
cccatcgactccatcttttcgccggtgcgtaaagtgtcctacaaggtcgataacagtcgt
gtcggccaagtcacggactacgacaagctgtccatggtcgtcgagaccgatggctctgtc
agtcccgaggatgcggtcgccctggcggcgcgtattctccaagatcagttgcagctcttc
atcaacttcgaagaaccgcaattgacctccgaggaaaagcgcgaggacgaactgccgttc
aacaagaaccttctgcgcaaggtggacgagttggaactgtcggtccgctcggccaattgc
ctgaagaacgacaacatcatctatatcggcgatctggttcagaagaccgaggccgagatg
ttgcgcacgcccaacttcgggcgaaagtcgctcaacgagatcaaggaagttctcgcccag
atgggtctgcacctgggcatggaaattcccaattggccccccgagaacatcgaggacttg
gccaagaagctcgaagagcactactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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