KEGG   Rickettsia prowazekii Rp22: rpr22_CDS558
Entry
rpr22_CDS558      CDS       T01977                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rpq  Rickettsia prowazekii Rp22
Brite
KEGG Orthology (KO) [BR:rpq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpq03032]
    rpr22_CDS558 (gyrB)
   03400 DNA repair and recombination proteins [BR:rpq03400]
    rpr22_CDS558 (gyrB)
Enzymes [BR:rpq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     rpr22_CDS558 (gyrB)
DNA replication proteins [BR:rpq03032]
 Prokaryotic type
  DNA Topoisomerases
   rpr22_CDS558 (gyrB)
DNA repair and recombination proteins [BR:rpq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      rpr22_CDS558 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 Peptidase_M75 GyrB_insert Med2
Other DBs
NCBI-ProteinID: ADE30117
UniProt: D5AXH8
Position
complement(729508..731931)
AA seq 807 aa
MSVIEEKCNESSYSADSIKVLKGLEAVRKRPGMYIGDVGDGSGLHHMIYEVVDNSIDEAL
AGYCDLVQVTLNKNGSVTVSDNGRGIPVEIHEEEGISAAEVIMTQLHAGGKFDQQSYKIS
GGLHGVGVSVVNALSEWLELRIWRNNKEYFIRFNNGITEAPLSIVKENIDKKGTEVTFFP
SVGTFTNIEFDFVTIEHRLRELAFLNSGVKILLVDNRFEEVKKVEFYYTGGIEAYVQYID
RAKHAIHPCIVVNTVHVESGISLELALHWNDSYHENILCFTNNIRQRDGGTHLSAFKSAI
TRVITSYLDTTGLNKKTKHDFSGEDTREGICCVLSVKVPDPKFSSQTKDKLVSSEVRPVV
ENAVYTKVLEWFEEHPTEAKAIIAKIMEAANAREAARKARELTRRKSALEVSNLPGKLAD
CHAKDPAISELFIVEGDSAGGTAKQGRDSKIQAILPLRGKILNVERARFDKMLGSDQIGT
LITALGISVEREFSLKKLRYHKVIIMTDADVDGSHIRALLLTFFYRHMPELINKGYLYIA
QPPLYKVKSGASELYLKNEKALQNYLIKSTINDTYLILDGQEQLVGENLEDLINKVVKFN
NLLDHVSKKFNRSITEILAINDLFNKKIFEPESSARLQKALDILNNLEESPDKTNLQVLK
HENKIEFFHFSRGLKETKILLKEQLELFEFVEISQFALSIFDIFSKRLKLIVKSKAFDIL
TPSQLLNTIIECGKKGITIQRFKGLGEMNSDQLWETTLDPTKRTLLQVRVAEVDEAEGIF
STLMGDVVEPRRLFIQANALNVMNLDV
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgtcggtaattgaagaaaaatgtaatgaatcatcatatagtgctgattctataaaggta
ttaaaaggtcttgaagcagtaagaaaaagaccaggaatgtacataggtgatgttggagat
ggatctggtctacatcatatgatttatgaagtagttgacaattctatcgatgaagcgctt
gctggttattgtgatttagtacaagtaacattaaataaaaatggttcagtaaccgtgtct
gataatggacgaggtatacctgttgaaattcatgaagaagaagggatatcggcagctgaa
gtaattatgacgcagcttcatgcgggtggtaagtttgatcagcagtcctacaagatttca
ggcggtctgcatggtgttggtgtatcggtagtaaatgcactttctgagtggcttgagctg
cgtatttggcgtaataataaagaatattttattagatttaataatggtataactgaagct
ccactttcaattgtcaaagaaaatattgataaaaaaggtacagaagttacttttttccca
tctgtaggtacattcactaatatagaatttgattttgtgactatagaacatcgtcttcga
gagcttgcatttttaaattcaggcgttaagattttactcgttgataatcgctttgaagaa
gttaaaaaagtagagttttattatacaggtggtatagaagcttatgtacaatatatagac
agagcgaagcatgctattcatccatgtatagtagtaaatactgtgcatgttgagtcaggt
ataagccttgagcttgcacttcattggaatgattcttatcatgagaatattctatgtttc
actaataatattaggcagcgtgacggtgggactcatcttagtgctttcaaatcagcgatt
acacgtgttatcacttcttatctagatactacaggtcttaataaaaaaactaaacatgat
tttagtggtgaagatactagagaagggatttgctgtgtattatctgttaaagtccctgat
cctaaattttcttctcaaacaaaagataagctagtaagttctgaagtacgacctgttgta
gagaatgccgtttatacaaaggttcttgagtggtttgaagaacatcctactgaagctaag
gcaattatagctaagattatggaagctgccaatgctcgtgaagctgctagaaaagcaaga
gaacttactcgaagaaaatcagctttagaagtttcaaatttaccaggtaaacttgcagat
tgccatgccaaagatcctgctatttcagaattgtttattgttgagggggactctgcgggt
ggtactgcaaagcagggaagggatagcaaaattcaggctatactgcctttgcgtggtaaa
attttgaatgttgaacgagcaagatttgataaaatgcttggttcggaccaaattggtaca
ttaattacagctcttgggattagtgttgaacgagaattttctttaaaaaagctgagatac
cataaagttattattatgaccgatgctgatgttgatggttcgcatattagagctttgttg
ctcacatttttttatcgtcatatgccagagcttataaataaaggttatctatatatagca
cagccaccgctttataaggtaaaaagtggtgcatctgagctttatttaaagaatgaaaaa
gctttgcaaaattatttaataaaatcaactattaatgatacatacttaattctagacggt
caagagcagttagtaggtgagaatttagaagatctaattaataaagtagttaagtttaac
aatttgcttgatcatgttagtaaaaaatttaatcgctcaattactgaaattcttgcaatt
aatgacttatttaataaaaaaatatttgaacctgaaagtagtgcaaggcttcaaaaagct
ttagatattttaaataatttagaggagtcaccagataaaactaatttgcaagtgttaaaa
catgagaataaaatagaattttttcattttagtagaggtttaaaagaaactaaaatattg
ttaaaagagcagttagaattatttgaatttgtagaaatatcacagtttgctttatcaatt
tttgatatatttagtaagcgattaaagcttatagtaaaaagtaaggcatttgatatttta
accccaagccagttgttaaatactattatagaatgcggtaaaaaaggtataactattcag
cgttttaaaggtcttggagagatgaattccgatcagctgtgggaaactactcttgatcct
acaaagcgaacgttgcttcaagtaagagttgctgaagtagatgaagcagaggggattttt
tctactttaatgggtgatgttgttgagcctcgtagattatttatccaagctaatgcttta
aatgttatgaatttagatgtatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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