KEGG   Rhodopseudomonas palustris TIE-1: Rpal_0887Help
Entry
Rpal_0887         CDS       T00722                                 

Definition
3-hydroxyacyl-CoA dehydrogenase
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
rpt  Rhodopseudomonas palustris TIE-1
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Class
Metabolism; Overview; Carbon metabolism [PATH:rpt01200]
Metabolism; Overview; Fatty acid metabolism [PATH:rpt01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:rpt00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:rpt00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:rpt00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:rpt01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:rpt00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rpt00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rpt00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:rpt00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:rpt00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:rpt00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:rpt00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
946609..948825
Genome map
AA seq 738 aa AA seqDB search
MAFKNFKVETDADGIALVTWDLPGKSMNVLDAATIEELGAIAEATTKDTAVKGVVITSAK
DAFCAGADLSMLESMNQQFAQIRKDKGEEAAQKMLFDESRKLSQILRGIETCGKPWVAAI
NGLALGGGFEVTLACHYRVAADNPKTRLGLPEIKVGLFPGGGGTQRIPRIVDPQSAMTIL
LKGDQIKLDKAKALKLVDAVVPAADLIKTAKDWIKNGGKAVALWDEKGFKLPGGQVFSKQ
GMMMFPAGNAIYRRETYDNYPAARAIMSCVYEGLLVPIDVALRIESRYFAHVLQTKEAAA
MIRSLFLSMQELNKGARRPQGVPPTKVKKLAIIGAGFMGASVGYVSAKAGIEVVLIDRDQ
ESADKGKAHCQSVIDGLIKKGRAKEADRDALMSRITATPDFNAISDCDLVIEAVFEDRKV
KAETYAKAQPLLKEGAIFASNTSTLPINSLAEEFKDQSKFIGIHFFSPVEKMMLVEVILG
NNTSDVTLATALDYTRQIGKTPIVVNDSRGFFANRCVLRFTAEGLEMLMEGVPAPMIETA
AKMAGMPVGPLSLADEVALDLILKIMKATEADLGEQAVDQQQKKLMVELVEKQGRFGRKN
AKGFYVYPEKGKGQKSLWDGIAALQPKHLDPDTIDVEELKQRFLAVQAVEAARTVEDNVI
VDPREADVGSILGFGFAPFTGGTLSYIDFMGTKEFVALCHKLEGKYGSRFTPPKLLEDMA
KTGDTFYHRFAPKKQAAA
NT seq 2217 nt NT seq  +upstreamnt  +downstreamnt
atggccttcaagaacttcaaagtcgagaccgacgccgacggcatcgcactggtgacctgg
gacctgcccggcaagtcgatgaacgtgctggacgctgcaacgatcgaggaactcggtgcg
atcgcggaagccaccaccaaggacacggcggtcaagggcgtggtgatcacctcggccaag
gacgcgttttgcgccggcgccgatctgtcgatgctggaaagcatgaaccagcagttcgcc
cagatccggaaagacaagggtgaagaagccgcccagaagatgctgttcgacgagagccgc
aagctgtcgcagatcctgcgcggcatcgagacctgcggtaagccgtgggtcgcggcgatc
aatggactggcgcttggcggcggcttcgaagtcacgctggcctgccactatcgcgtcgca
gccgacaatccgaagacccggctcggcctgcccgagatcaaggtcggcctgttcccgggc
ggcggcggtacccagcggattccgcgcatcgtcgatccgcagagcgcgatgacgatcctg
ctcaagggcgatcagatcaagctcgacaaggccaaggcgctgaagctggtcgacgcggtg
gtgccggcggccgatctgatcaagactgccaaggactggatcaagaacggcggcaaggcg
gtggcgctgtgggacgagaagggcttcaagctgcccggcggccaggtgttctccaagcag
ggcatgatgatgttcccggccggcaacgccatctatcgccgcgagacctacgacaactat
ccggccgcgcgcgcgatcatgagctgcgtctatgagggcctgttggtgccgatcgacgtc
gcgctgcggatcgagtcgcgctacttcgcgcacgtgctgcagaccaaggaagcggcggcg
atgatccgcagcctgttcctgtcgatgcaggagctgaacaagggcgcgcgccgtccgcag
ggtgtgccgcccaccaaggtcaagaagctcgccatcatcggcgctggcttcatgggcgcc
agcgtcggctacgtctcggccaaggccggcatcgaggtggtgctgatcgatcgcgaccag
gagagcgccgacaagggcaaggcacattgccagtcggtcatcgacggtctcatcaagaaa
ggccgcgccaaggaagccgaccgcgacgcgctgatgtcgcgcatcactgcgacgccggac
ttcaatgcaatctcggattgcgacctcgtcatcgaagcggtgttcgaggatcggaaagtg
aaggccgagacctacgccaaggcccagccgctgctcaaggaaggcgcgatcttcgcgtcg
aacacctcgacgctgccgatcaattcgctggccgaggagttcaaggaccagtcgaagttc
atcggcatccacttcttctcgccggtcgagaagatgatgctggtcgaagtgatcctcggc
aacaacaccagcgacgtcacgctggcgaccgcgctcgactacacccgccagatcggcaag
accccgatcgtggtgaacgacagccgcggcttcttcgccaaccgctgcgtgctgcgcttc
accgccgagggccttgagatgctgatggaaggcgtcccggcgccgatgatcgagaccgcg
gccaagatggccggcatgccggtcggcccgctgtcgctggccgacgaagtggcgctcgat
ctgatcctgaagatcatgaaggcgaccgaagcggatctcggcgaacaggcggtcgatcag
cagcagaagaagctgatggtcgagctggtcgagaagcagggcaggttcggccgcaagaac
gccaagggcttctacgtctatccggagaagggcaaggggcagaagagcctgtgggacggc
atcgccgcgctgcagccgaagcacctcgatcccgatacgatcgatgtcgaagagctgaag
cagcgcttcctggctgtgcaggcggtggaagcggcccgcacggtcgaggacaacgtcatc
gtcgacccgcgcgaggccgatgttggctcgatcctcggcttcggcttcgcgccgttcacc
ggcggcacgttgagctacatcgacttcatgggcaccaaggagttcgtggcgctgtgccac
aagctcgagggcaaatacggctcgcgcttcactccgccgaagctgctcgaagacatggcc
aagaccggcgataccttctaccaccgcttcgccccgaagaagcaggcggcggcgtag

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