KEGG   Rhodopseudomonas palustris TIE-1: Rpal_4053
Entry
Rpal_4053         CDS       T00722                                 
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
rpt  Rhodopseudomonas palustris TIE-1
Pathway
rpt00300  Lysine biosynthesis
rpt00550  Peptidoglycan biosynthesis
rpt01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rpt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Rpal_4053
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Rpal_4053
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rpt01011]
    Rpal_4053
Enzymes [BR:rpt01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Rpal_4053
Peptidoglycan biosynthesis and degradation proteins [BR:rpt01011]
 Precursor biosynthesis
  Amino acid ligase
   Rpal_4053
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: ACF02549
UniProt: B3QFN6
Position
complement(4350352..4351809)
AA seq 485 aa
MKLRDLFSAEADIAAPAAALAIGGLAVDSRAVKPGDLFFALAGAKTDGARFVAAAVATGA
VAVAGEHRPEGDLAVPFVQLSNARLALAQAAARFYPRQPEVIAAVTGTSGKTSVAAFTRQ
IWQRLGHASASIGTIGLVTPTRSVYGSLTTPDPIALHRSLDEIAREGITHLALEASSHGL
DQFRLDGVRVAAGGFTNLSRDHMDYHPTVAHYLNAKLRLFRNLVQDGGAAVISADHDCSA
QVIEAAGARGLRLITIGRNGDPGAGIKLIDATVEGFAQQLTVEHAGKRHRIKLPLVGEFQ
IENALVAAGLVIGTGGDAAASFAALEHLEGAPGRLDLVGARNGAPVFVDYAHKPDALAKT
LQALRPYAKRKLVVVFGAGGDRDSGKRPLMGAIAAENADVVIITDDNPRSEDPATIRSAI
LAAAPGAREIGDRAEAIRTAIGELQPGDALVIAGKGHETGQIVGDRVLHFSDHDAANAAL
SASAA
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgaagcttcgcgatctcttcagcgccgaggccgacatcgccgcgccagcggccgctctc
gccatcggcgggctcgccgtcgacagccgcgcggtgaagccgggcgacctgttcttcgcg
ctcgccggggccaagaccgacggggcgcggttcgtcgcggcggcggtcgcgacaggggcg
gtggcggttgcgggcgagcaccggccggagggcgaccttgcggtgccgttcgtgcagctg
tccaatgcgcgcctggcgctggcacaggccgcggcgcggttctatccgcgccagcccgag
gtgatcgcggccgtcaccggcaccagtggcaaaacctcggtcgcggccttcacccggcaa
atctggcagcggctcggccatgcctccgccagcatcggcaccattggtctcgtcaccccg
acgcgcagcgtgtacggctcgctgaccacgccggacccgatcgcgctgcatcgctcgctt
gatgaaatcgcccgcgaaggcatcacccatctggcgcttgaagcctcgtcgcatgggctg
gatcagttccggctcgacggcgttcgcgtcgcggcaggcggcttcaccaatttgtcgcgc
gaccacatggattatcaccccaccgtcgcgcactatctcaatgccaagttgcggctgttc
cgcaatctggtgcaggacggcggcgcggcagtgatctccgccgatcacgactgttcggcc
caagtgatcgaagcggcgggcgcccgcggcctgcggctgatcacgatcggccgcaacggt
gatccgggcgcaggcatcaagctgatcgacgccacggtcgaaggcttcgcgcaacagctc
acggtcgagcacgcggggaagcggcatcgcatcaaactgccgctggtcggcgaattccag
atcgagaacgcgctggtcgcggcaggtctggtgatcggcaccggcggcgacgcggcggcg
agcttcgccgcgctcgaacatctcgaaggtgcgccgggccggctcgatctggttggcgcc
cgcaacggcgcaccggtgttcgtcgactacgcgcacaagcccgatgcgctcgccaaaacc
ctgcaggcgctgcgtccctatgccaagcgcaagctggtcgtggtgttcggcgccggcggt
gatcgcgactccggcaagcggccgctgatgggcgcgatcgcagctgagaacgccgacgtg
gtgattatcaccgacgacaatccgcgcagtgaagatcccgccacgatccgctccgccatt
cttgcggctgcgcccggcgcgcgcgagatcggcgatcgcgccgaggcgatccgcacagcg
atcggcgagctgcagccgggtgatgcgctggtgatcgccggtaagggccacgaaaccggg
cagatcgtgggcgaccgcgtgctgcatttcagcgaccacgacgccgcgaatgcggcgcta
tcagcgagcgccgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system