KEGG T01381: Rpdx1

Rhodopseudomonas palustris DX-1: Rpdx1_0071

Entry

Rpdx1_0071 CDS T01381

Definition

tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

rpx Rhodopseudomonas palustris DX-1

Pathway

rpx00260	Glycine, serine and threonine metabolism
rpx00400	Phenylalanine, tyrosine and tryptophan biosynthesis
rpx01100	Metabolic pathways
rpx01110	Biosynthesis of secondary metabolites
rpx01230	Biosynthesis of amino acids

Module

rpx_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:rpx00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rpx00400]

SSDB

Motif

Pfam:

PALP PNP_UDP_1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

74795..76009

AA seq 404 aa
MNQALPNSFRSGPDERGHFGIYGGRFVAETLMPLILDLEKAYAEAKVDPAFRAEMDSHLK
HYVGRPSALYFAERLTEHFGGAKIYFKREDLNHTGAHKVNNVLGQIMLAKRMGKPRVIAE
TGAGMHGVATATMCAKFGLECVVFMGAVDVERQQPNVLRMKALGAEVRPVTSGANTLKDA
MNEALRDWVTNVHDTFYCIGTVAGPHPYPMMVRDFQAVIGQEVREQIMQAEGRLPDSLIA
CIGGGSNAMGLFHPFLDDPGVAIYGVEAAGHGLDKLHAASIAGGKPGVLHGNRTYLLMDA
DGQIEEAHSISAGLDYPGVGPEHSWLNDVGRVKFLSATDTEALDAFKLCCRLEGIIPALE
PSHALAKVADLAPKLPKDHLMVVNMSGRGDKDLASVAEHLGGQF

NT seq 1215 nt +upstreamnt +downstreamnt
atgaaccaagctttgccgaattccttccggtccggccccgacgagcgcgggcatttcggc
atctatggcggccgcttcgtcgccgagacgctgatgccgctgatcctcgatctggaaaag
gcctatgcggaagccaaggtcgacccggcattccgcgccgagatggacagccatctcaag
cactatgtcggacgtccctcggcgctgtatttcgccgagcggctgaccgagcatttcggc
ggcgccaagatctacttcaagcgtgaagacctcaaccacaccggcgcccacaaggtgaac
aacgtgctcggccagatcatgctggccaagcgcatgggcaagccgcgggtgatcgcagag
accggcgccggcatgcacggcgtcgccaccgcgacgatgtgcgccaagttcggtctcgaa
tgcgtggtgttcatgggggcggtcgacgtcgaacgccagcagcccaacgtgctgcggatg
aaggcgctcggtgccgaagtccgccccgtcacctccggcgccaatacgctgaaggacgcg
atgaacgaggcgctgcgtgactgggtcaccaacgtccacgacaccttctactgcatcggc
accgtggccggtccgcacccctatccgatgatggtgcgcgacttccaggcggtgatcggc
caggaagtccgcgagcagatcatgcaggccgaaggccgcctcccggactcgctgatcgcc
tgcatcggcggcggctccaacgcgatgggcctgttccatccgttcctggacgatccgggc
gtcgcgatctacggcgtcgaagccgcaggccacggcctcgacaagctgcatgcggcctcg
atcgccggtggcaagccgggcgtgctgcacggcaaccgcacctacctgttgatggatgcg
gacggccagatcgaggaagcgcattcgatctccgccggcctcgactatccgggcgtcggc
ccggagcattcctggctgaacgacgtcggacgggtcaaattcctgtccgccaccgacacc
gaagcgctcgacgccttcaagctgtgctgtcgactggaaggaatcatcccggcgctggag
ccgagccacgcgctcgccaaggtcgcggacctcgcgccgaagctgccgaaggatcacctg
atggtcgtcaacatgtccggccgcggcgacaaggatctcgcctcggtcgccgaacatctc
gggggccaattctaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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