KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_0579
Entry
Rpdx1_0579        CDS       T01381                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rpdx1_0579
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rpx02044]
    Rpdx1_0579
Secretion system [BR:rpx02044]
 Type IV secretion system
  Trb secretion system protein
   Rpdx1_0579
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ADU42218
UniProt: E6VLG5
Position
621459..622670
AA seq 403 aa
MNTRNENDHEQAVPPETQAEQSESFRLRAEHPRVTRLSRKVLAGGSAVALLVIGGAVLWS
LQSNRARNQAADELYSTDHHNVADGITTLPKDYAGVPRQPIPQLGPPLPGDLGRPILAAQ
GQSPTSGADPDQQRRDQETEAARISHLFASTNGREVRPSATAAVGSERVVPPNATSTGDD
GSVQNGQDRKLAFVNASVDRRTVSPDRITRPASPYVVQAGTVIPGALITGIRSDLPGQVT
AQVTENVFDTPTGRFLLVPQGARLIGIYDSQVTFGQSRVLLVWTRLIMPNGRSIVLERQP
GVDAAGYAGLEDQVDNHWGELFKAAALSTFLAVGTELGAGSDTNSNDSAIIQALRHGASD
SLNQTGQQVVRRSLNIQPTLTIRPGFPVRVIVNRDLRLEPYTG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaacacccggaatgaaaacgatcacgagcaagcagttccgccggagacacaagcggag
cagtccgaaagtttccgcttgagagcggagcatccgcgcgtgacgcggttgtcgcggaag
gtcttggctggcgggagcgcggttgccctgcttgttatcggcggagcagtgttgtggtca
cttcagagcaatcgtgctcgaaatcaggcggccgatgagctttacagcaccgaccatcac
aatgttgccgacggcattacgaccctgccgaaggactatgctggcgttccgcgccagcca
atcccgcagcttggtccgccgctccccggtgacctcggtcgaccgatccttgccgctcaa
ggccagtcgccgacgagcggcgctgatccggaccagcagcgccgggatcaggagaccgaa
gcagcccgcatcagtcatctgttcgcttcgaccaatggacgagaagtgcgtccgtccgcg
actgcggctgttggaagcgagcgggtcgtgccaccgaacgcaacgagcaccggcgacgat
ggatctgtgcaaaacggtcaggaccggaagcttgccttcgtcaacgcctctgtggaccgt
cgcacggtaagccctgaccgcatcaccaggccggcctcaccgtatgtcgtgcaggctggg
acggtcattccgggtgccctgatcaccgggatccgatcagaccttccgggccaggttaca
gcgcaggtaaccgaaaatgtttttgataccccgaccggccgctttctgcttgtgcctcag
ggagcgcgtctgatcggcatctacgatagccaggtcactttcggccagtcccgcgtcctg
ctcgtctggacccggctgatcatgccgaacggacgttctatcgttctcgagcggcagcct
ggcgttgacgctgccgggtatgcaggcctcgaagaccaggtcgacaatcactggggtgag
ctgttcaaggctgcggccctatcgacgtttctggcggtcgggaccgaactgggtgccggc
tcggacaccaacagcaacgacagcgcaattatccaggccttgcgacacggcgcctcggac
tcactgaatcaaaccggacaacaggtggttcggcgcagtctcaacatccagccgaccctg
acgatccgcccgggttttccggttcgtgtcatcgtcaaccgggatctccgcctcgagcct
tacacaggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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