KEGG T01381: Rpdx1

Rhodopseudomonas palustris DX-1: Rpdx1_1817

Entry

Rpdx1_1817 CDS T01381

Definition

UDP-N-acetylmuramyl tripeptide synthetase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

rpx Rhodopseudomonas palustris DX-1

Pathway

rpx00300	Lysine biosynthesis
rpx00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:rpx00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:rpx00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1933756..1935213

AA seq 485 aa
MKLRDLFSAETEIAASAADRPIGGLAVDSRAVRPGDLFFALAGAKTDGARFVAAAIAAGA
VAVAGEHPPAGDLAVPFVQLSNPRLALAQAAARFYPRQPEVIAAVTGTSGKTSVAAFTRQ
IWQRLGHASASIGTIGLVTPTRSVYGSLTTPDPIALHRSLDEIAGEGITHLALEASSHGL
DQFRLDGVRVAAGGFTNLSRDHMDYHPTVAHYLNAKLRLFRHLVQDGGAAVIAADHDCSA
EVIEAAGARGLRLITIGRNGDPGEGIALIDAAIDGFAQILTVAHAGRRYSIKLPLVGEFQ
IENALVAAGLVIGTGGDSAASFAALEHLEGAPGRLDLVGAHRGAPVFVDYAHKPDALAKS
LQALRPYAKRKLVVVFGAGGDRDAGKRPLMGAIAAEHADTVIVTDDNPRSEDPAAIRAAI
LAAAPGARAIGDRAEAIRTAIGELQPGDALVIAGKGHETGQIVGDRVLPFSDHDAAKAAL
SASAA

NT seq 1458 nt +upstreamnt +downstreamnt
atgaagctccgcgacctgttcagcgccgaaaccgagatcgccgcgtcggcggccgaccgc
cccatcggcggactcgccgtcgacagccgcgcggtgcggccgggtgatctgttcttcgcg
ctcgccggtgcgaagaccgacggcgcgcggttcgtcgccgcggcgatcgccgcgggggcc
gtggcggtcgcaggcgagcatccgccggccggcgatctcgcagtaccgttcgtacagctc
tcgaacccgcgactggcgctggcgcaggccgcggcgcgattctatccgcggcagccggag
gtgatcgccgcggtcaccggcaccagcggcaagacctcggttgcggccttcacccggcag
atctggcagcggctcggccatgcctccgccagcatcggcaccatcgggctggtgacgccg
acgcgcagcgtttacggctcgctgaccacgccggacccgatcgcgctgcatcgctcgctg
gacgagatcgcgggcgagggcatcacccatctggcgctggaggcgtcgtcgcacgggctc
gatcagttccggctcgacggcgtccgcgtcgccgccggcggcttcaccaacctgtcgcgc
gaccatatggattatcaccccacggtcgcgcactatctgaatgccaagctgcggctgttc
cgccacctggtgcaggacggcggcgccgcggtgatcgccgccgatcacgactgctcggca
gaggtgatcgaggcggccggggcgcgcggcctgcggctgatcaccatcggtcgcaacggc
gatccgggcgaggggatcgcgctgatcgatgcggccatcgatggcttcgcccaaatccta
acggtcgcgcatgccggccgtcgctacagcatcaagctgccgctggtcggcgagttccag
atcgagaacgcgctggtcgcagccggtctggtaatcggcaccggcggcgattcggcggcg
agcttcgcggcgctcgaacatctcgaaggcgctcctgggcggctcgatctggtcggcgcc
catcgcggcgcgccggtgttcgtcgactatgcgcacaagcccgacgcgcttgccaagtcg
ctgcaggcgctgcggccctacgcaaagcgcaagctggtggtggtgttcggcgccggcggc
gaccgcgatgccggcaagcggccgctgatgggcgcgatcgccgccgagcatgccgacacg
gtgatcgtcaccgacgacaatccgcgcagcgaagatcccgccgcgatccgcgctgcgatc
ctcgctgccgcgcccggcgcgcgcgcgatcggcgaccgtgccgaggcgatccgcaccgcg
atcggcgaattgcagccgggcgacgcgctggtgatcgccggcaagggccacgaaaccggg
cagatcgtgggtgaccgcgtgctgccgttcagcgatcacgacgccgcgaaagcggcgcta
tcagcgagcgccgcatga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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