KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_2726
Entry
Rpdx1_2726        CDS       T01381                                 
Name
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx03030  DNA replication
rpx03430  Mismatch repair
rpx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Rpdx1_2726
   03430 Mismatch repair
    Rpdx1_2726
   03440 Homologous recombination
    Rpdx1_2726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpx03032]
    Rpdx1_2726
   03400 DNA repair and recombination proteins [BR:rpx03400]
    Rpdx1_2726
Enzymes [BR:rpx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Rpdx1_2726
DNA replication proteins [BR:rpx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Rpdx1_2726
DNA repair and recombination proteins [BR:rpx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Rpdx1_2726
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA_24 AAA_16 AAA Mg_chelatase
Other DBs
NCBI-ProteinID: ADU44311
UniProt: E6VIJ3
Position
complement(2917992..2919047)
AA seq 351 aa
MSARKAAGKAPAPESTVRHPRETTELYGHHAAEQALLGAYRGGRIAHAWLIGGAQGIGKA
TLAYRMARFVLTHRDPQSDAVQGAASLAIDPDHPVARHIAAEAHGGLLTLERSVNDKGVL
RNVITVDESRETISFFGATAAIDGWRVCIVDTVDDLNANSANALLKVIEEPPQRSLFLLL
SNAPARTLPTIQSRCRKLMLRPLATADVIAAAADAAGLDRDDPQLGEAAAASEGSVARAL
MLMGGGALTLQQTTTALLDSLPNVDPRALHALGDAIGGTDRATLQAFVDGVDRWVAGKLR
TPDPNAELPRLARLAEVWEKIGRAARDTEAYNLERKPLVFSVFGLLAEAVR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgagcgcacgcaaggccgccggcaaagcgccggcgccggaaagcacagtccggcacccg
cgcgaaaccacagagctgtatggccatcacgccgccgagcaggcattgctcggtgcctat
cggggcggccggattgcccatgcctggctgatcggcggtgcgcagggaatcggcaaggcg
acgctcgcctaccggatggcgcggttcgtgctgacgcatcgcgacccgcaatcggacgcg
gtgcagggcgccgcctcgctggcgatcgaccccgaccatccggtggcgcgccacatcgcc
gctgaggcgcatggcggcctgctgacgctggagcgctccgtcaacgacaagggcgtgctg
cgcaacgtcatcaccgtcgatgaatcccgcgagacgatctcgttcttcggcgcgaccgcg
gcgatcgacggctggcgggtgtgcatcgtcgacaccgtcgatgacctcaacgccaattcg
gccaacgcgctgctgaaggtgatcgaggagccgccgcagcgttcgctgtttctgctgctg
tcgaacgcgccggcgcgcacgctgccgaccatccagtcgcgctgccgcaagctgatgctg
cggccgcttgccaccgccgacgtgatcgcggccgcagcggatgcggccggtctcgaccgc
gatgatccgcagctcggcgaggccgccgcagcgtcggaaggaagcgtcgcccgcgcgctg
atgttgatgggcggcggcgcattgacgctgcagcagaccacgacggcgctgctcgacagc
ctgcccaacgtcgacccgcgcgcgctgcatgcgctcggcgatgcgatcggcggcaccgac
cgcgccacgctgcaggcgttcgtcgacggcgtcgaccgctgggtcgccggcaagctgcgc
acgcccgatccgaacgcggaactgccgcgccttgcacggctggcggaggtatgggaaaag
atcggccgcgccgcacgcgacaccgaagcctacaatctcgagcgcaagccgctggtattt
tcggtgttcgggcttctcgcggaggcggtgcgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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