KEGG T01381: Rpdx1

Rhodopseudomonas palustris DX-1: Rpdx1_3352

Entry

Rpdx1_3352 CDS T01381

Definition

RuBisCO-like protein

Orthology

K01601

ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]

Organism

rpx Rhodopseudomonas palustris DX-1

Pathway

rpx00630	Glyoxylate and dicarboxylate metabolism
rpx00710	Carbon fixation in photosynthetic organisms
rpx01100	Metabolic pathways
rpx01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:rpx00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:rpx00710]

SSDB

Motif

Pfam:

RuBisCO_large

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3586115..3587215)

AA seq 366 aa
MNERIVVTYQVAAAPAEIAARAEALAIEQSVECPLAAVTEQRIRDEILGRVEAIEPIGEA
RFAVRISLASATAPAEPGQLINMLFGNSSILPDVTLADVELPPAYPAAFGGPKFGIGGIR
ARLGVPRRALTASALKPQGLPPEALASLAHRLALGGIDLIKDDHGIADQAFSPFAARVPA
VAAALRQASDSCGATTLYAPHVSGSLDDMRRQLDIVRREELPAVMLMPMVVGLANFHLVA
KEAAGLIVLAHPSLAGAQRIAPDLLLGKLFRLLGADATIFPHHGGRFAYAPGTCRALAGA
ARRDWHDLKPCLPVPAGGIAIDRIAALLAFYGSDVMLLIGGSLLAAGEHLTEQAARFTAE
VASHGQ

NT seq 1101 nt +upstreamnt +downstreamnt
atgaacgaacggatcgttgtcacctatcaggtcgccgcggccccggcagagatcgctgcg
cgcgccgaggcgctggcgatcgagcagagcgtcgagtgcccgctggcggcggtgacggag
cagcgcatccgcgacgagatcctcggccgggtcgaagcgatcgagccgatcggcgaagcg
cgtttcgcggtgcggatcagcctggcgagcgcaaccgcgccggccgagcccgggcagctc
atcaacatgctgttcggcaacagttcgatcctgcccgacgtgacgctggccgacgtcgag
ctgccgccggcctatccggccgcgttcggcgggccgaagttcggcattggcggtattcgc
gcccggctcggggtgccgcggcgggcgctgaccgcgtcggcgctgaagccgcaggggctg
ccaccggaagcgctggcgagtcttgcgcaccggctggcgctcggcggcatcgacctgatc
aaggacgaccacggcatcgccgaccaggccttcagtccgttcgccgcgcgggtgcccgcg
gtcgccgccgcgctgcgccaggccagcgactcgtgcggcgccaccacgctgtacgcgccg
cacgtctcgggctcgctcgacgacatgcggcggcagctcgacattgttcgtcgcgaagag
ctgccggcggtgatgctgatgccgatggtcgtcgggctggcgaatttccatctggtggcc
aaagaggccgcaggcttgatcgtgctggcgcatccgtcgctggccggcgcgcagcggatc
gcgcccgatctgctgctcggcaagctgttccggctgctcggcgccgacgcgacgatcttc
ccgcatcatggtggccggttcgcctatgcgccgggcacctgccgcgcgctggcgggtgcg
gcgcggcgcgactggcacgatctgaagccgtgcctgccggtgccggccggcggcatcgcg
attgatcggatcgccgcactgctggcattctacggctccgacgtgatgctgctgatcggc
ggcagcctgctggccgccggcgaacacctgaccgagcaggcagctcgtttcaccgcggag
gtggcaagccatggccaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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