KEGG T01381: Rpdx1

Rhodopseudomonas palustris DX-1: Rpdx1_4819

Entry

Rpdx1_4819 CDS T01381

Definition

ribulose-bisphosphate carboxylase (EC:4.1.1.39)

Orthology

K01601

ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]

Organism

rpx Rhodopseudomonas palustris DX-1

Pathway

rpx00630	Glyoxylate and dicarboxylate metabolism
rpx00710	Carbon fixation in photosynthetic organisms
rpx01100	Metabolic pathways
rpx01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:rpx00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:rpx00710]

SSDB

Motif

Pfam:

RuBisCO_large RuBisCO_large_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(5175457..5176842)

AA seq 461 aa
MDQSNRYANLNLKESELIAGGRHVLCAYIMKPKAGFGNFIQTAAHFAAESSTGTNVEVST
TDDFTRGVDALVYEIDEAKSLMKIAYPIELFDRNVIDGRAMIASFLTLTIGNNQGMGDVE
YAKMYDFYVPPAYLKLFDGPSTTIKDLWRVLGRPVINGGFIVGTIIKPKLGLRPQPFANA
CYDFWLGGDFIKNDEPQGNQVFAPFKDTVRAVSEAMRRAQDKTGEAKLFSFNITADDHYE
MLARGEFILETFADNADHVAFLVDGYVAGPAAVTTARRAFPKQYLHYHRAGHGAVTSPQS
QRGYTAFVLSKMSRLQGASGIHVGTMGFGKMEGEASDRAAAFMITEDAADGPYFHQEWLG
MNPTTPIISGGMNALRMPGFFDNLGHSNLIMTAGGGAFGHVDGGAAGAKSLRQAEQCWKQ
GADPVEFAKDHREFARAFESFPQDADKLYPNWRAKLKPQAA

NT seq 1386 nt +upstreamnt +downstreamnt
atggaccagtcgaaccgctacgccaacctcaacctcaaagagagcgagctgatcgcgggc
ggacggcatgtgctgtgcgcctacatcatgaagccgaaggccggcttcggcaacttcatc
cagaccgccgcgcacttcgccgccgaatcctcgaccggcaccaacgtcgaagtctccacc
accgacgacttcacccgcggcgtcgacgcgctggtgtacgagatcgacgaggccaagagc
ctgatgaagatcgcgtacccgatcgagctgttcgatcgcaacgtgatcgatggccgggcc
atgatcgcctcgttcctcaccctgacgatcggcaacaaccagggcatgggcgacgtcgaa
tacgccaagatgtacgacttctacgtgccgccggcttacttgaagctgttcgacggcccg
tcgacgaccatcaaggatctgtggcgcgtgctcggtcggccggtgatcaacggcggcttc
atcgtcggcaccatcatcaagccgaagctcggcctgcgtccgcagccgttcgccaatgcc
tgctacgatttctggctgggcggcgacttcatcaagaacgacgagccgcagggcaaccag
gtgttcgcgccgttcaaggatacggtgcgtgccgtctccgaggcgatgcgccgggcgcag
gacaagaccggcgaggccaagctgttctcgttcaacatcaccgccgacgatcactacgag
atgctggcgcgcggcgagttcattctcgagaccttcgccgacaatgccgaccacgtcgcc
ttcctggtcgatggctacgtcgccggcccggcggcggtgaccaccgcacgccgcgcgttc
ccgaagcagtacctgcactatcatcgggccggccacggtgcggtgacctcgccgcaatcg
cagcgcggctacaccgccttcgttctgtccaagatgtcgcgactgcagggcgcctcgggc
atccatgtcggcaccatggggttcggcaagatggaaggtgaagcctccgatcgggccgcg
gccttcatgatcaccgaggatgcggccgacggtccgtacttccaccaggagtggctcggt
atgaacccgaccaccccgatcatctccggcggcatgaacgcgctgcggatgccgggcttc
ttcgacaatctcggccattccaacctgatcatgacggcgggcggcggtgcgttcggccac
gtcgatggcggcgcggcgggcgccaagtcgctgcgtcaggccgaacagtgctggaagcag
ggcgcagacccggtcgagttcgccaaggatcaccgcgaattcgcccgcgcgttcgagagc
ttcccgcaggacgccgacaagctgtatccgaactggcgcgccaagctgaagccgcaggcg
gcgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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