KEGG   Rhodococcus pyridinivorans: Y013_00940Help
Entry
Y013_00940        CDS       T02974                                 

Definition
5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rpy  Rhodococcus pyridinivorans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rpy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Y013_00940
Enzymes [BR:rpy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Y013_00940
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Y013_00940
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
199435..200298
Genome map
AA seq 287 aa AA seqDB search
MPELPEVEVVRRGLDAHVVGATVDSVQVLHPRAVRRHEPGPRDLALQVTGQKVASVERRG
KYMWLVLEPADLALVVHLGMSGQMLVQPPTVPDEKHLRIRAVLDNGADLRFVDQRTFGGW
ALAPLVEVDGDRLPLPVAHIARDPMDPRFHPDAVVAVLRTKHTEIKRALLDQTVVSGIGN
IYADEALWRARIHGNRPTDALSRPKLRSALDAATEVMAEALGQGGTSFDALYVNVNGESG
YFERSLNVYGRENEPCRRCGAPIRREKFMNRSSYSCPKCQPRPRTTR
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaacttcccgaggtcgaggtggtccgtcgcggactcgacgcgcacgtcgtcggc
gcgactgtggactcggtgcaggtgctgcatccgcgtgccgtccgacggcacgagcccggt
ccgcgcgatctcgcactgcaggtgaccggtcagaaggtcgcttcggtcgagcgccgcggc
aagtacatgtggctcgtgctcgaaccggccgatctggctctcgtggtgcatctggggatg
agcgggcagatgctcgtgcagcctccgaccgtgccggacgagaagcatctgcgtatccgc
gccgtcctcgacaacggtgccgatctgcgtttcgtcgaccagcgcaccttcggaggctgg
gccctggccccgctcgtggaggtggacggtgatcgtctgccgctgccggtcgcgcacatc
gcccgcgacccgatggatccccggttccacccggatgcggtcgtggccgtgctgcgcacc
aagcacaccgagatcaagcgtgcgctgctcgaccagaccgtcgtctccggcatcggcaac
atctacgccgacgaagcgctgtggcgcgcaaggattcacggcaaccggcccaccgacgcg
ctgtcgcgtccgaagctccggtcggctctcgatgcggccaccgaggtgatggcggaggcc
ctcgggcagggtggtacgtcgttcgacgccctgtacgtcaacgtcaacggggagtccggc
tacttcgagcgttccctgaacgtctacggacgcgagaacgagccgtgccgacgctgcggc
gcgccgatccgccgcgagaagttcatgaaccgctcgtcgtacagctgcccgaagtgtcag
ccacgaccgcgaacgacccggtag

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