KEGG   Rhodococcus pyridinivorans SB3094: Y013_06210
Entry
Y013_06210        CDS       T02974                                 
Name
(GenBank) pyruvate dehydrogenase E1
  KO
K00163  pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00010  Glycolysis / Gluconeogenesis
rpy00020  Citrate cycle (TCA cycle)
rpy00620  Pyruvate metabolism
rpy00785  Lipoic acid metabolism
rpy01100  Metabolic pathways
rpy01110  Biosynthesis of secondary metabolites
rpy01120  Microbial metabolism in diverse environments
rpy01200  Carbon metabolism
rpy01210  2-Oxocarboxylic acid metabolism
Module
rpy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Y013_06210
   00020 Citrate cycle (TCA cycle)
    Y013_06210
   00620 Pyruvate metabolism
    Y013_06210
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Y013_06210
Enzymes [BR:rpy01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.4  With a disulfide as acceptor
    1.2.4.1  pyruvate dehydrogenase (acetyl-transferring)
     Y013_06210
SSDB
Motif
Pfam: PDH_E1_M Transketolase_N Transketolase_C
Other DBs
NCBI-ProteinID: AHD20290
UniProt: V9XE98
Position
1300937..1303663
AA seq 908 aa
MASYLPDIDPAETEEWLESFDGMLEAAGPTRARYLLLRMLERANERKVSLPALTSTDYVN
TIPTESEPWFPGDEEVERRFRAYIRWNAAIMVTRAQRPGVGVGGHISTYASSAALYEVGF
NHFFRGKDHPGGGDQVFIQGHASPGIYARAFLEGRIGTEQLDGFRQEHSHASLGGGLPSY
PHPRLLPTFWEFPTVSMGLGPMNAIYQARFNHYLHDRGIKDTSDQHVWAFLGDGEMDEPE
SRGLAHVAATEGLDNLTFVVNCNLQRLDGPVRGNGKIIQELESFFRGSGWNVIKVVWGRE
WDALLHADKDGALVNLMNATPDGDYQTYKANDGAFVREHFFGRDPRTKELVKDLSDQQIW
NLKRGGHDYRKIYAAYKAAMEHKGQPTVILAHTIKGYTLGKHFEGRNATHQMKKLTLEDL
KYFRDIQRIPISDEELEKDPKMPPYYHPGFESPEIQYMLERRRALGGFLPERRTTAKPLA
LPAEKTYDVVRKGSGKQEVATTMATVRVLKELLRDKEIGKRIVPIIPDEARTFGMDSWFP
SLKIYNRNGQLYTSVDADLMLAYKESEVGQILHEGINEAGSTASFTAVGTSYATQGEPMI
PVYIFYSMFGFQRTGDGLWAAADQMARGFALGATAGRTTLTGEGLQHADGHSLLLASTNP
AAVTYDPAFSYEIAHIFRDGLRRMYGGTEGVDGFGGEDVFYYITIYNEPYSQPAEPEDLD
VEGLLKGIYLYKRGPESGPKAQILVSGVMMPEALRAQKMLADEWGVSADVWSVTSWGELR
RDGVECDRQALLNPGEEASVPYVASVLNDAAGPFVAVSDWMRAVPDQIRKWVPGDYTVLG
ADGFGFSDTRGAARRVFNIDAESTVVAVLSALGREGAIDREKAVEAARTYKIDDVTAAPV
SMADPGVA
NT seq 2727 nt   +upstreamnt  +downstreamnt
gtggcctcctatctgccggacatcgatccggcggagaccgaagagtggctcgagtcgttc
gacgggatgctcgaggccgcgggccccacccgcgcgcgctacctgctgctgcgcatgctc
gagcgtgccaacgagcgcaaggtctcccttcccgccctgacctccaccgactacgtcaac
accatccccaccgagagcgaaccgtggttccccggtgacgaggaggtcgagcgtcgcttc
cgcgcgtacatccggtggaacgcggcgatcatggtcacccgcgcgcagcgcccgggtgtc
ggcgtcggtggtcacatctccacctacgcgtcgtccgccgccctgtacgaggtcggcttc
aaccacttcttccgcggcaaggaccatcccggcggcggcgaccaggtcttcatccagggc
cacgcctcccccggtatctacgcccgagccttcctcgagggccgcatcggcacggagcag
ctcgacggcttccgtcaggagcacagccacgcctcgctcggcggcggcctgccctcgtac
ccgcacccgcgcctgctcccgaccttctgggagttcccgaccgtgtccatgggcctgggc
ccgatgaacgcgatctaccaggcacggttcaatcactacctgcacgaccggggcatcaag
gacacctccgatcagcacgtctgggcgttcctcggcgacggcgagatggacgagccggag
tcgcgcggtctggcgcacgtcgcggccaccgagggtctcgacaacctgaccttcgtcgtc
aactgcaacctgcagcgtctcgacggcccggtgcgtggcaacggcaagatcatccaggag
ctggagtcgttcttccgcggctccggctggaacgtcatcaaggtcgtgtggggccgcgag
tgggacgccctgctgcacgccgacaaggacggcgcactggtcaatctcatgaacgccacc
cccgacggcgactaccagacctacaaggccaacgacggcgcgttcgtgcgcgagcacttc
ttcggccgcgacccgcggacgaaggaactggtcaaggacctgtccgaccagcagatctgg
aacctcaagcgcggtggccacgactaccgcaagatctacgcggcctacaaggcggcgatg
gagcacaagggtcagccgacggtgatcctcgcgcacaccatcaagggctacacgctcggt
aagcacttcgagggccgcaacgcgacccaccagatgaagaagctcaccctcgaggacctc
aagtacttccgcgacatccagcggatcccgatctcggacgaagagctcgagaaggacccg
aagatgccgccgtactaccaccccggcttcgagtcgcccgagatccagtacatgctcgag
cgtcgccgggccctcggcggtttccttccggagcgccgcaccaccgcgaagccgttggcg
ctgcccgcggagaagacctacgacgtcgtccgcaagggttcgggcaagcaggaggtcgcc
accaccatggcgacggtccgtgtgctcaaggaactgttgcgcgacaaggagatcggcaag
cgcatcgtgccgatcatcccggacgaggcccgcaccttcggtatggactcgtggttcccg
tcgctgaagatctacaaccgcaacggtcagctgtacacctcggtcgacgccgatctgatg
cttgcctacaaggagagcgaagtcgggcagatcctgcacgagggcatcaacgaggccggt
tcgacggcgtcgttcacggcggtcgggacgtcctacgcaacgcagggcgagccgatgatc
cccgtgtacatcttctactcgatgttcggtttccagcgcacgggcgacggcctgtgggcg
gcggccgaccagatggcacgcgggttcgccctcggcgcgacggccggtcgcaccacgctg
accggtgagggcctgcagcacgccgacgggcactcgctgctgctcgcgtcgaccaacccg
gccgcggtcacctacgacccggcgttctcctacgagatcgcccacatcttccgcgacggt
ctgcggcggatgtacggcggcacggagggtgtcgacggcttcggcggtgaggacgtcttc
tactacatcaccatctacaacgagccgtactcgcagccggccgagccggaggatctcgac
gtcgagggccttctcaagggcatctacctgtacaagcggggaccggagtcgggtccgaag
gcgcagatcctggtctcgggcgtgatgatgcccgaggcgctgcgtgcgcagaagatgctc
gccgacgaatggggagtgtccgcggacgtctggtccgtcacttcgtggggcgagctgcgc
cgcgacggcgtcgagtgcgaccgccaggcgctgctgaaccccggtgaggaagcctcggtg
ccgtacgtcgcgtcggtgctcaacgacgcggcgggtccgttcgtcgcggtgtccgactgg
atgcgcgcggtgcccgatcagatccgcaagtgggttccgggcgactacacggtgctcggc
gccgacggcttcggcttctccgacacccgtggcgccgcccgccgcgtgttcaacatcgac
gccgagtccacggtggtcgcggtgctctcggcactcggccgcgaaggcgcgatcgatcgt
gagaaggccgtcgaggcggcccgcacctacaagatcgacgacgtgacggccgccccggtc
tcgatggcggatccgggcgtcgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (9)   
   KEGG MODULE (1)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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