KEGG   Rhodococcus pyridinivorans SB3094: Y013_11400
Entry
Y013_11400        CDS       T02974                                 
Name
(GenBank) 1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
rpy  Rhodococcus pyridinivorans SB3094
Pathway
rpy00250  Alanine, aspartate and glutamate metabolism
rpy00330  Arginine and proline metabolism
rpy01100  Metabolic pathways
rpy01110  Biosynthesis of secondary metabolites
Module
rpy_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:rpy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Y013_11400
   00330 Arginine and proline metabolism
    Y013_11400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rpy03000]
    Y013_11400
Enzymes [BR:rpy01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Y013_11400
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Y013_11400
Transcription factors [BR:rpy03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Y013_11400
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AHD21230
UniProt: V9XGX2
Position
2459438..2462749
AA seq 1103 aa
MRIVEDAVALARRWVEESSEVAPDRAARHLADVLKDPHGLEFTVRFVDEVIRPEDPATAA
HALAELSRNIPDFLPVHLRAAVRAGGTIGPRFPHLVVPAARRALRAMVGHLVVDTDEAAL
GRAIARLRRPGIRLNLNLLGEAVLGDDEARRRFEGTLALLARDDVDYVSLKVSAAVAPHS
PWAFDETVADIVERLAPLYRLAATSPTPKFVNLDMEEYHDLDVTVAAFTTLLDRPEFLHL
EAGIVLQAYLPDALTAMIELQRWAASRRARGGAAIKIRVVKGANLPMERVDASLHGWPLA
TWSTKQETDTNYKRLLHYAFTPERIENVRIGVAGHNLFDIAYAWELAGRRQVRNGIDFEM
LLGMAQSQAEVIRRHVGSLLLYTPVVRPDEFDVAISYLVRRLDEGSGQENFMSAVFDLAD
DPALFEREEQRFRASVAALDEDAPSPNRTQNRQEPPIPAPPVFTNTPDTDPSLPQNREWG
RRILERVPSSKLGIDTVRAHALSSEEQLERVLVDATAAGRAWGARSGAERARILEQVADV
LEARRADLLEVMAAEGGKTLDQSDPEVSEAIDFARYYAERARALDEIDGARFVPSTLTVV
TPPWNFPVAIPAGSTLGALASGSAVVLKPATLTARCGSVLAEAMWDAGVPRDVLHLVHAD
ERSLGTKLVSDPRVDRVVLTGAYETAELFRSLRPGMRLLAETSGKNAIVVTPSADPDLTV
RDVVQSAFGHAGQKCSASSLVILVGSVATSRRFRDQLVDAVRSLPVGPAHDPRTRMGPLI
EPARGKLLTALTELEDGESWLVEPRRLDEEGRLWTPGVRTGVRRGSRTHLVEFFGPVLGV
MTAADLDEAIAIQNEVDYGLTAGLHSLDSDEIARWLDRVQAGNVYVNRGITGAIVRRQPF
GGWKKSSVGAGFKAGGPNYLFGFGSWEPCIWDEDTLRRAFEDDEQVWTSEFAVAHDVTGL
SAERNLFRYRPVRTHVRLGEAGRPDELVRVLGAAARAGAPVEISSAFALDLVRCSNTARF
GGRVRVESDVEWEERIVDTTPARVRLIGAAPPAEWNTRCDIAVFDHPVTGSGRIEMLPFL
AEQSVTITAHRFGTPHRLTDEII
NT seq 3312 nt   +upstreamnt  +downstreamnt
gtgcggatcgtcgaggatgctgtcgccctggcccgccggtgggtggaggaatcgtcggag
gtcgcacccgaccgtgcggcccgccacctcgccgacgtcctgaaggacccccacggactc
gagttcaccgtgcgcttcgtcgacgaggtcatccgccccgaggatcctgcgaccgccgcg
cacgccctggccgaattgtcccggaacataccggatttccttcccgtccatctccgcgcg
gccgtgcgggcgggcggcacgatcggtccccgcttcccgcacctcgtcgtccccgccgcg
cgtcgcgcgctccgggcgatggtggggcacctcgtcgtcgacacggacgaggccgcgctg
ggccgggccatcgcacgactgcgacgacccggcatccggctcaacctcaatctgctgggc
gaggccgtcctcggcgacgacgaggcccgccgccgtttcgagggcaccctcgcactgctg
gcacgcgacgacgtcgactacgtctcgctcaaggtctcggcggccgtcgcgccgcactcg
ccgtgggccttcgacgagaccgtcgccgacatcgtcgagcggctcgccccgctgtaccgc
ctcgccgcgacctcgccgacgccgaagttcgtcaacctcgacatggaggagtaccacgac
ctggacgtgacggtcgcggcgttcacgacgctgctcgaccgtcccgagttcctccatctc
gaggctgggatcgtgctgcaggcgtatctgcccgacgccctgaccgccatgatcgaactg
cagcggtgggcggcgtcgcgacgcgcgcgcggcggcgccgcgatcaagatccgggtggtc
aagggcgccaacttgccgatggaacgggtcgacgcgtcgctgcacgggtggccgctcgcg
acgtggagcaccaagcaggagaccgacacgaactacaagcggctgctgcactacgcgttc
acacccgagcggatcgagaacgtgcggatcggagtggccgggcacaaccttttcgacatc
gcctacgcgtgggagctcgccggtcgccggcaggtgcgcaacgggatcgacttcgagatg
ctgctcggcatggcgcagagccaggccgaagtgatccgtcggcacgtcggcagcctgttg
ctctacacgcccgtcgtccgtcccgacgagttcgacgtcgcgatctcgtatctggtgcgt
cgactcgacgagggttcggggcaggagaacttcatgtcggcggtgttcgatctcgccgac
gaccccgccctgttcgagcgcgaggagcagcggttccgcgcgtcggtggcggcgctcgac
gaggacgccccctcccccaaccgcacgcagaaccgacaggagccgcccatcccagcgccg
ccggtgttcacgaacacgccggacaccgatccgtccctgccgcagaaccgggagtggggt
cgccgcatcctcgagcgggtgccgtcgtcgaagctcggcatcgacaccgtgcgtgcgcac
gccctctcctccgaggaacaactcgaacgcgtgctggtcgatgcgacggcggccggtcgc
gcctggggtgcccgcagcggtgccgagcgcgcacggatcctcgaacaggtggccgatgtg
ctcgaagcgcgtcgcgccgatctgctcgaggtgatggcggccgagggcggtaagaccctc
gaccagtccgatccggaggtctcggaagcgatcgacttcgcgcggtactacgccgagcgg
gcccgcgcgctcgacgagatcgacggtgcgcggttcgtgccgtcgaccctcaccgtcgtc
acgccgccctggaacttccccgtcgcgatcccggcggggtcgacgctcggagcactggcg
tccggttcggcggtggtcctcaagcccgcgaccctcacggcacggtgcgggtcggtgctc
gccgaggcgatgtgggatgccggtgtgccccgcgacgttctgcacctcgtccacgccgac
gaacggtcgctgggcacgaagctcgtctccgatccccgcgtcgaccgggtggtgctcacc
ggtgcctacgagaccgccgaactgttccgttcgctgcgtccggggatgcggctgctcgcc
gagacgagcggcaagaacgcgatcgtcgtgacgccgagcgccgatccggatctcacggtg
cgcgacgtcgtgcagtcggcgttcgggcatgccgggcagaagtgctcggcgtcgtcgctc
gtgatcctcgtcggctccgtggcgacctcccgccgtttccgcgaccagctcgtcgacgcg
gtgcggtcgctgccggtcggtcccgcacacgatccgcgaacccgcatggggccgttgatc
gaaccggctcggggcaagctgctcaccgcgctcaccgaactcgaggacggcgagtcgtgg
ctcgtcgaaccgcgacggctcgacgaggagggtcggctgtggacgcccggcgtacgcacc
ggagtgcgacgcgggtcgcgcacgcatctcgtcgagttcttcggtccggtgctgggggtg
atgaccgcggccgatctggacgaggcgatcgcgatccagaacgaggtggactacggactc
acggcgggtctgcactcgctggattcggacgagatcgcccgctggctcgatcgggtgcag
gccgggaatgtgtacgtcaatcgcggtatcaccggtgccatcgtgcgacggcagccgttc
ggcggttggaagaagtcgtcggtgggagccggcttcaaggcgggcgggccgaactatctc
ttcggcttcggttcctgggaaccgtgcatctgggacgaggacacgctgcgtcgggcgttc
gaagacgacgaacaggtgtggacgtcggaattcgctgtggcacacgatgtcacaggactc
tcggcagagcggaacctgttccggtaccggcccgttcgcacacacgtacgcctcggtgag
gccgggcggcccgacgaactcgtgcgcgtactcggtgccgcagcccgggcgggcgcgccg
gtggaaatctcttcggctttcgccctcgatctcgtaagatgctcgaatacagcacgtttc
ggcggtcgcgtgcgcgtggagagtgatgtggaatgggaggaacggatcgtcgacacgacc
ccggcgcgtgtccgcctgatcggcgccgcgccgcccgccgaatggaacacccgatgcgac
atcgcggtgttcgaccatccggtgaccggatccggacgaatcgaaatgctgccgttcctg
gccgaacagtccgtcacgatcaccgctcatcgattcggcacaccgcaccggctcaccgac
gagatcatctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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