KEGG   Rhodococcus qingshengii: C1M55_00010
Entry
C1M55_00010       CDS       T05315                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
rqi  Rhodococcus qingshengii
Pathway
rqi03030  DNA replication
rqi03430  Mismatch repair
rqi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C1M55_00010
   03430 Mismatch repair
    C1M55_00010
   03440 Homologous recombination
    C1M55_00010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rqi03032]
    C1M55_00010
   03400 DNA repair and recombination proteins [BR:rqi03400]
    C1M55_00010
Enzymes [BR:rqi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C1M55_00010
DNA replication proteins [BR:rqi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C1M55_00010
DNA repair and recombination proteins [BR:rqi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C1M55_00010
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3 SEF14_adhesin
Other DBs
NCBI-ProteinID: AUS29655
UniProt: A0A069JSU0
Position
1:2167..3351
AA seq 394 aa
MELGSLKFRVSREEFADSVAWVARSLPSRPPVPVLGGVLLDATEAGLTVSGFDYEVSAQV
RVSADVTTAGQALVSGRLLADITKSLPNKPVDVTLEGTRVLISCGSAKFSLPTMPVEDYP
QLPTLPQQSGSIPVDLFSEAISQVAVAAGKDDTLPMLTGIRVEIEQNSIVLAATDRFRLA
VRELEWTPANPDVQAAVLIPAKTLSESAKTLAGNANSPVELALGSGTTIGNDGLLGIVND
GRRTTTRLLDAEFPKFRQLLPAQHTAMATVEVTPLIEAIKRVALVAERGAQVRMQFSADG
LLLSAGGDDAGRAEETLNASFQGEALTIAFNPGYLIDGLNSLHSENVLFGFTTPSRPAVL
RPAAEEEPTADESGNFAAPSSEYTYLLMPVRLPG
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggagcttggaagcctgaagtttcgcgtttcccgggaagagttcgctgattcagtagcg
tgggttgctcgtagcctgccctcgaggccgcccgtgccggttctcggcggagttcttctc
gacgcaaccgaagccggcctcaccgtttccgggttcgactacgaggtatccgcgcaggtc
cgcgtctcggcagatgtcacaactgcaggtcaggcactcgtctccggtcgcctcctcgca
gatatcaccaagtcgcttcccaacaagccggtcgatgtgaccctcgagggcactcgcgtg
ctcatctcgtgcggaagcgccaagttctccctgcccacgatgccggtcgaggactacccc
cagcttccgacgcttccgcagcagtccgggtccattcccgtcgacctgttctccgaagcc
atcagccaggtagctgttgcagccggcaaggacgacacccttccgatgctcacgggtatc
cgtgtcgagatcgaacagaattcgatcgtcctcgccgctaccgaccgcttccgtctcgcc
gtacgtgaactcgagtggactccggccaatcccgacgtccaggctgctgttctcatcccg
gccaagactttgtccgagtccgcgaaaacgcttgccggcaatgcaaattcgccggtcgag
ttggctctcggctccggtacgaccatcggaaacgacggactcctcggcatcgtcaacgac
ggacgccgcaccacgacgcgcctcctcgacgccgagttcccgaagttccgtcagttgctg
cctgctcagcacaccgcgatggcaacggtcgaggtcacgcctctcatcgaggccatcaag
cgtgtagcactcgtcgccgagcgtggcgcacaggttcgcatgcagttctccgctgacggc
ctgctcctctctgcgggtggcgacgacgccggccgcgcggaagagacgctcaacgcgtcg
ttccagggcgaagcactcaccattgcgttcaaccccggttacctcatcgacgggttgaat
tcgcttcacagcgaaaacgttctgttcggcttcaccactcccagccgtccggctgttctt
cgccccgcggccgaggaagagcccacggcagacgaatccggtaacttcgctgcgccctcg
agcgagtacacgtacctgctgatgccggttcgccttccgggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system