KEGG   Rhodococcus qingshengii: C1M55_06840
Entry
C1M55_06840       CDS       T05315                                 
Name
(GenBank) molecular chaperone DnaK
  KO
K04043  molecular chaperone DnaK
Organism
rqi  Rhodococcus qingshengii
Pathway
rqi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rqi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1M55_06840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rqi03019]
    C1M55_06840
   03110 Chaperones and folding catalysts [BR:rqi03110]
    C1M55_06840
   03029 Mitochondrial biogenesis [BR:rqi03029]
    C1M55_06840
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rqi04147]
    C1M55_06840
Messenger RNA biogenesis [BR:rqi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     C1M55_06840
Chaperones and folding catalysts [BR:rqi03110]
 Heat shock proteins
  HSP70 / DNAK
   C1M55_06840
Mitochondrial biogenesis [BR:rqi03029]
 Mitochondrial protein import machinery
  Matrix
   MMC/PAM proteins
    C1M55_06840
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    C1M55_06840
Exosome [BR:rqi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   C1M55_06840
  Exosomal proteins of breast cancer cells
   C1M55_06840
  Exosomal proteins of colorectal cancer cells
   C1M55_06840
SSDB
Motif
Pfam: HSP70 MreB_Mbl ParM_N
Other DBs
NCBI-ProteinID: AUS30854
UniProt: A0AA41F652
Position
1:1477641..1479494
AA seq 617 aa
MARAVGIDLGTTNSVVAVLEGGEPVVVANAEGSRTTPSVVAFAKNGEVLVGQPAKNQAVT
NVDRTLRSVKRHIGTDWNVEIDGKKYTPQEISARTLMKLKRDAEAYLGEDITDAVITVPA
YFEDAQRQATKEAGQIAGLNVLRIVNEPTAAALAYGLDKGDTEQTILVFDLGGGTFDVSL
LEIGDGVVEVRATSGDNHLGGDDWDERVVAWLVDKFKAQNGIDLTKDKMALQRLREAAEK
AKIELSSSQSTSINLPYITVDADKNPLFLDEQLTRSEFQKITSDLLDRTRAPFQAVIKDS
GIAVKDIDHVVLVGGSTRMPAVSDLVRELTGGREPNKGVNPDEVVAVGAALQAGVLKGEV
KDVLLLDVTPLSLGIETKGGVMTKLIERNTTIPTKRSETFTTADDNQPSVQIQVFQGERE
IASHNKLLGSFELTDLPPAPRGVPQIEVTFDIDANGIVHVTAKDKGTGKENTIKIQDGSG
LSKEEIERMVKDAEAHAEEDKARREEAEVRNQAESLVHQTEKFVKEQREGENAGKVSEEI
LTKVEAAVKDVNDALAGTDIAAVKTAVEKLGTESQALGQAIYEASAANEAGNTDGAGNDD
DVVDAEVVDEPTDSDKK
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggctcgtgcagtcggtatcgatctcggtacgaccaactcggtagttgcagtgctggag
ggcggcgagcccgtagtggtcgccaacgccgaaggctcacgtaccaccccctcggtggtc
gcatttgccaagaacggcgaggttctcgtcggtcagcccgcgaagaaccaggcagtcacg
aacgtcgaccgcaccctccgctccgtcaagcgccacatcggcactgactggaacgtggaa
atcgacggcaagaagtacacgccgcaggaaatcagcgcccgcacgctcatgaagctcaag
cgtgacgcggaggcttacctcggcgaagacatcaccgacgccgtcatcaccgtccccgcg
tacttcgaggacgcacagcgtcaggcaaccaaggaagccggccagatcgccggcctcaac
gtccttcgtatcgtcaacgagcccaccgcggctgcactggcatacggactcgacaagggt
gacaccgagcagaccattctggtcttcgacctcggtggcggcaccttcgacgtctccctg
ctcgaaatcggcgacggtgtcgtcgaggttcgcgcaacctccggtgacaaccacctcggt
ggcgacgactgggacgagcgcgtcgtcgcttggctggtcgacaagttcaaggctcagaac
ggcatcgatctgaccaaggacaagatggccctgcagcgtctgcgtgaggctgcggagaag
gcgaagatcgagctctccagctcgcagagcacctccatcaacctcccgtacatcacggtc
gacgcggacaagaacccgctcttcctggacgagcagctcacccgcagcgagttccagaag
atcacctcggacctgctcgatcgcactcgtgcgccgttccaggcagtgatcaaggacagt
ggaatcgccgtcaaggacatcgaccatgtcgtgctcgtcggtggctccacccgtatgccg
gccgtctccgatctggttcgtgaactgaccggtggccgtgagcccaacaagggcgtcaac
ccggacgaggtcgtcgccgtcggcgccgcactccaggccggtgtgctcaagggtgaggtc
aaggacgttctgctcctcgacgtcacgccgctttccctcggcatcgaaaccaagggtggc
gtgatgaccaagctcatcgagcgcaacaccacgatccccacgaagcgttccgagaccttc
accaccgctgacgacaaccagccttcggtgcagatccaggtcttccagggtgagcgcgaa
atcgcttcgcacaacaagctgctcggctccttcgagctcaccgatctgccgcccgccccg
cgtggcgttccgcagatcgaggtcaccttcgacatcgacgccaacggcatcgtgcacgtg
acggcgaaggacaagggcaccggcaaggaaaacacgatcaagatccaggacggctccggt
ctgtccaaggaagagatcgagcgcatggtcaaggacgccgaggctcacgccgaggaagac
aaggcccgtcgcgaagaggcagaggttcgcaaccaggccgagtcgctggtccaccagacg
gagaagttcgtcaaggagcagcgtgaaggtgagaacgcgggcaaggtctccgaggagatc
ctgaccaaggtcgaggcagcggtcaaggacgtcaacgacgccctggcaggcaccgacatc
gctgcagtgaagaccgcagtggagaagctgggcaccgagtcgcaggctctgggccaggcc
atctacgaggcttccgctgcaaacgaggccggaaacaccgacggcgcaggcaatgacgac
gacgtcgtcgacgccgaggttgtcgacgagcccaccgactcggacaagaagtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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