KEGG   Rhodococcus qingshengii: C1M55_15275
Entry
C1M55_15275       CDS       T05315                                 
Name
(GenBank) lycopene cyclase family protein
  KO
K06443  lycopene beta-cyclase [EC:5.5.1.19]
Organism
rqi  Rhodococcus qingshengii
Pathway
rqi00906  Carotenoid biosynthesis
rqi01100  Metabolic pathways
rqi01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:rqi00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    C1M55_15275
Enzymes [BR:rqi01000]
 5. Isomerases
  5.5  Intramolecular lyases
   5.5.1  Intramolecular lyases (only sub-subclass identified to date)
    5.5.1.19  lycopene beta-cyclase
     C1M55_15275
SSDB
Motif
Pfam: Lycopene_cycl FAD_binding_2 NAD_binding_9 Thi4 Pyr_redox_2 DAO NAD_binding_8 TrkA_N FAD_oxidored NAD_binding_7 FAD_binding_3 HI0933_like F420_oxidored 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: AUS32326
UniProt: A0AA34VZM1
Position
1:complement(3247562..3248692)
AA seq 376 aa
MSTDNSSADVVIVGGGPAGRALATRCIARQLTVVVVDPHPHRVWTPTYSAWADELPSWLP
VDVIASRIQRPSVWTRRQKTLDRTYCVLNTSLLQSFLSGTSVQFRAVRAQTLSPTAVLCV
DGSQLRGSVVIDARGTDLTVTTAQQTAFGVIVDRALADPILGGGEAWFMDWRTDNGASDA
DTPSFLYAVPLDDERVLLEETCLVGRPALGLRELEARLRTRLRNRGCEVPDDAPVERVRF
AVEGPKESFPDGVLRFGGRGGLMHPGTGYSVASSLAEADAVAKAIADGGDPNAALWPRSA
KAVSALRRVGLNALLTLGSGEVATFFDTFFDLPVEAQRSYLSDRRDASATAKVMATLFRS
SPWHVRKTLMRAPFLR
NT seq 1131 nt   +upstreamnt  +downstreamnt
gtgagcacagacaactcctccgccgacgtggtgatcgtcggtggcggcccggccgggcgg
gcactcgccacccgctgtatcgcccggcaactcaccgtcgtcgttgtcgatccgcatccc
catcgggtgtggacgccgacctattcggcgtgggctgacgagctgccgtcgtggctgccc
gtcgatgtaatcgcaagccggatccaacgcccgagcgtgtggacccgcagacagaaaacg
cttgatcgcacatattgcgtattgaatacatcattactgcaatcatttctctcgggcaca
tccgtacagttcagagccgtgcgtgctcaaacactgtcacctaccgccgtcctgtgcgtg
gacggatcgcagctgaggggatccgtcgtcatcgacgcccgaggcaccgatctgacggtg
acaaccgcccagcagaccgccttcggagtgatcgtcgaccgcgctctggccgatccgatt
ctgggtggtggcgaagcctggttcatggactggcgaacagacaacggcgcctccgacgcc
gacactccgtcgtttctctatgcggtcccactcgatgacgagcgagttctcctcgaggag
acctgcctcgtcggccggccggcgttggggctccgcgaactcgaagcgcgtctgcgcacc
cggcttcgcaatcggggctgcgaagtccccgacgacgcaccggtcgagcgggtccgtttt
gcagtcgaaggcccgaaggagtcgttccccgacggtgtactccgtttcggcgggcgaggc
ggtctgatgcatccgggaaccggatacagcgttgcctcgtcactcgccgaggcagacgct
gtcgccaaagcaatcgccgacggtggagatcccaacgcggcgctctggccgcggtcggcc
aaggcggtgtctgcccttcgccgcgttggcctgaacgcacttctcaccctcggctcggga
gaggtcgcgacattcttcgacacgttcttcgatctaccggtcgaggctcagcggtcctac
ctgtccgatcggcgggacgcgtccgcgacggcgaaggtgatggcaaccctgttccgatcg
tcaccgtggcacgtccgaaagacgttgatgcgcgcgccgtttctgaggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (39)   

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