KEGG   Rickettsia rickettsii Arizona: RPO_01500
Entry
RPO_01500         CDS       T01721                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
rra  Rickettsia rickettsii Arizona
Pathway
rra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RPO_01500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rra03400]
    RPO_01500
DNA repair and recombination proteins [BR:rra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RPO_01500
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RPO_01500
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H Kinesin AAA_22 AAA_7 Microtub_bd P-loop_SecA DUF87 AAA_5 SWI2_SNF2
Other DBs
NCBI-ProteinID: AFB24556
Position
complement(272974..274959)
AA seq 661 aa
MNNFSIISEYKPAGDQPKAIDEIIAGLSSKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYSEMKSLFPKNAVEYFVSYYDYYQPEAYIARTDTFIEKDSSINEQIDL
MRHAATRSLLERRDVIVVSSVSCIYGLGSPDLYYQMVVNLEPGQSYLRDQLLNDLINLQY
ERNDIGFERGCFRVKGDNIDIFPSHYSDKAWRLSFFGNELEYIHEFDPLTGEKLAKLDKA
IVFGNSHFVMPQETVNNAISGIEEELQKRLEFLKSQDKPLETQRLNQRTQYDLEMLTETG
SCKGVENYSRFFTGRNAGEPPPTLFEYLPEDALLFVDESHVSVPQIRAMYNGDRARKKVL
VEHGFRLPSALDNRPLKFEEWDKFRPQTVFVSATPGPFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTIAQGFRVLVTTLTKKMAEDLTAYLQELKYKTSYLHSNVH
TLERIEILRDLRQGTIDVLVGINLLREGLDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSAGRVILYADKMTKSIDKAVSETLRRRQIQQEYNEKHGIIPKTINRAIHALAEFEK
IDSKLDKKQAHTLFDNPAKLKTHIDKLKKEMLKAASNLEFEQAVKLRDQLKTLEEAALEL
S
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgaataatttttctattatctcagaatataaaccggcaggcgatcaaccaaaagcaata
gatgaaattatagcagggttaagtagcaaaaaacgctcacaaatgttgcttggtattacg
ggatcaggcaaaacctttactatggcaaatattatagagagaactaatcgtcctactctt
attatggctcataataaaactttagctgcccaaatctattcagagatgaaatcgcttttt
ccaaagaatgccgttgaatactttgtctcatattatgattattaccagcccgaagcttat
atagcacgcaccgatacttttatagaaaaagactcatcaattaacgaacaaattgattta
atgcgtcatgccgctacaagatcgctattagagcgtcgtgacgttatagtagtttcttcc
gtttcctgtatttacggccttggctctcccgatttatattaccaaatggtggttaatcta
gagcctggtcaaagctaccttcgtgatcaactactaaacgatttgataaatctacaatat
gagcgtaacgatatcggatttgagcgtggctgttttagagttaaaggcgacaacatcgat
attttcccctcacattacagcgataaagcttggcgtttatcgtttttcggtaatgaactc
gaatatatccatgaatttgatcccctaacaggtgaaaaacttgctaagctcgataaagct
atagtttttggtaattcacattttgtgatgcctcaagaaacggtcaataatgccatatca
ggtattgaagaagaattacaaaaacgcttagagtttttaaagtcacaagacaaaccactt
gaaactcaaaggctaaatcaacgtactcaatatgatcttgaaatgttaacggaaaccggc
agctgtaaaggagttgaaaactactctcgctttttcacaggacgtaatgccggtgagccg
cctcctacattattcgaatacctaccagaagatgcattattatttgttgatgaaagccat
gtatccgtaccgcaaattagagcgatgtataacggcgatcgagcaaggaaaaaagttttg
gtagagcatgggtttcgtctaccctctgcacttgataacagacctttaaaatttgaagaa
tgggacaaatttagaccacaaactgtgtttgtatctgcaactccaggaccgttcgagtta
gaagaaaccggcggcacggttgtagaattgattattagacctactgggctgcttgatcct
gaatgtattatcaaacccgctactaaccaagttgaggatttaattagcgaaattcaaacc
actatcgctcaaggttttcgtgttctagtcaccaccttaactaaaaaaatggcagaagat
ttaaccgcctatttgcaggagctaaaatataaaacttcttatttacattctaacgttcat
actctcgaacgtatagagattttacgagatttaagacaaggtactattgatgttttagtc
ggtattaatctattaagggaggggcttgacatccctgaatgcggcttagttgctatactt
gatgcagacaaagaggggtttttgcggtcggaagtatcgttaatacaaacaataggaaga
gctgcaagaaatagcgcgggtagagttatactttatgccgataaaatgactaaatctatc
gataaagctgttagtgaaacgttgcgtagaaggcaaattcagcaggaatataatgaaaaa
cacggcataattccaaaaaccatcaaccgtgctattcacgctttagcagaatttgagaaa
atcgatagtaagcttgataaaaaacaagctcatactttatttgataatcctgctaagcta
aaaacccatattgataaattaaagaaagaaatgcttaaagccgcaagtaatcttgaattt
gaacaagccgtaaaacttcgtgatcagctaaaaactctagaagaagcggcactcgagttg
agttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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