KEGG   Rhodospirillum rubrum F11: F11_00820
Entry
F11_00820         CDS       T02006                                 
Symbol
groEL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rrf  Rhodospirillum rubrum F11
Pathway
rrf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rrf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F11_00820 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rrf03019]
    F11_00820 (groEL)
   03110 Chaperones and folding catalysts [BR:rrf03110]
    F11_00820 (groEL)
   03029 Mitochondrial biogenesis [BR:rrf03029]
    F11_00820 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rrf04147]
    F11_00820 (groEL)
Enzymes [BR:rrf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     F11_00820 (groEL)
Messenger RNA biogenesis [BR:rrf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     F11_00820 (groEL)
Chaperones and folding catalysts [BR:rrf03110]
 Heat shock proteins
  HSP60 / Chaperonin
   F11_00820 (groEL)
Mitochondrial biogenesis [BR:rrf03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    F11_00820 (groEL)
Exosome [BR:rrf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   F11_00820 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   F11_00820 (groEL)
  Exosomal proteins of breast cancer cells
   F11_00820 (groEL)
  Exosomal proteins of colorectal cancer cells
   F11_00820 (groEL)
  Exosomal proteins of bladder cancer cells
   F11_00820 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEO46634
Position
187808..189439
AA seq 543 aa
MAAKDVKFSSDARDRLLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELKDKFENMGAQMLREVASKSADVAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGI
DLAVAAVVKDVKTRSRKIATNDEIAQVGTISANGDEEVGKIIARAMDKVGHEGVITVEEA
KGLDTELDVVEGMQFDRGYLSPYFVTNAEKMVADLENPYILIHEKKLSGLQPLLPVLEAV
VQSGRPLLIIAEDVEGEALATLVVNRLRGGLKVASVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLETVTLDMLGTAKTVTITKDNTTIVDGAGVKADIDARCAQIRATIEDTTSDY
DREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALL
HAAKALDALSPANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYN
AQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEKKPALPAGGGMGD
MDF
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggctgccaaagacgtcaagttttccagcgacgcccgtgatcgcctgctgcgcggcgtc
gacaccctggccaatgcggtcaaggtgacgctcggccccaagggccgcaacgtggtgatc
gacaaaagcttcggcgccccgcgcatcaccaaggacggcgtgtccgtcgccaaggaaatc
gaactgaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaggtcgcctccaaa
tccgccgatgtcgccggcgatggcacgaccaccgccaccgtgctggcccaggccatcgtc
cgcgagggcagcaaggcggtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gatctggcggtcgccgccgtcgtcaaggacgtgaagacgcgctcgcgcaagatcgccacc
aatgatgaaattgcccaggtcggcaccatctcggccaatggcgatgaagaggtcggcaag
atcatcgcccgggcgatggacaaggtcggtcacgagggcgtgatcaccgtcgaggaggcc
aagggcctcgataccgagctcgacgtggtcgaaggcatgcagttcgatcgcggctatctg
tcgccctatttcgtgaccaacgccgagaagatggtcgccgatctggaaaacccctacatc
ctgatccacgaaaagaagctctcgggcctgcagccgctgctgccggtgctcgaagccgtc
gtccagtcggggcggccgctgctgatcatcgccgaagatgtcgagggcgaggccctggcc
accctggtggtcaaccgtctgcgcggcggcctcaaggtcgcctcggtcaaggccccgggc
tttggcgatcgccgcaaggcgatgctcgaagacatcgccatcctgaccggtgggcaggtg
atcagcgaagacctgggcatcaagcttgagaccgtcaccctcgacatgctgggcacggcc
aagacggtgacgatcaccaaggacaacaccaccatcgtcgacggcgccggcgtcaaggcc
gatatcgacgcccgctgcgcccagatccgcgccaccatcgaagacaccactagcgattac
gaccgggaaaagctgcaagaacgtctggccaagttgtcgggcggcgtcgcggtgatccgg
gttggcggtgccagcgaagtcgaggtcaaggagaagaaggaccgcgtcgacgacgcgatg
cacgccacccgcgccgccgttgaggaaggcatcatcgccggcggcggtgtcgccctgctg
catgcggccaaggccctggacgccctgagcccggccaacgccgatcagaaggtcgggatc
gagatcgtgcggcgcgccctgcaggcgccggtgcgccagatcgccgagaacgccggcgtc
gatggcgccgtggtcgccggcaagctgcttgaaagctccgatgccgatttcggctacaac
gcccagaccggggtctatgagaatctggtcaaggtcggggtgatcgatccgaccaaggtc
gtgcgcaccgccctccagggggcggcctcggtggcctcgctgctgatcaccaccgaggcg
atggtcgccgaaatccccgagaagaagccggccctgcccgccggcggcggcatgggcgac
atggacttctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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