KEGG   Rhodospirillum rubrum F11: F11_19430Help
Entry
F11_19430         CDS       T02006                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rrf  Rhodospirillum rubrum F11
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rrf00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    F11_19430
Enzymes [BR:rrf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     F11_19430
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     F11_19430
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4349659..4350504
Genome map
AA seq 281 aa AA seqDB search
MPELPEVETVRLGLTPALVGERLSRVAARRPALRLPIPVDLVQRLTGKVVGSLDRRAKYL
LLRMIDGPVALIHLGMSGSMTVGPLAGHAEPGPHDHILFETEAGLRVTFRDPRRFGLITL
AEPETLDDHPLLAKLGPEPLSEAFDAEVLVRRLNGRQAPIKAALLDQGVVAGLGNIYVSE
ALFRAGISPLRPAASVTGAWAEALVAAIRAVLGEAIAAGGSSLRDHRQTDGALGYFQHRF
AVYDRVGQPCPGCDCDVARTGGIERMVQSGRSTFFCGRRQR
NT seq 846 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattacccgaagtggaaaccgtgcgcttgggcttgaccccggctcttgtcgga
gaacggctaagccgggtggcggcgcgacggccggcgctgcgtctgccgatcccggtcgat
ctggtccaacggctgaccggaaaggttgtcggtagtctcgatcgccgggctaagtatctg
ttattacgcatgatcgatgggccggtggcgctgatccatcttggcatgtcgggcagcatg
accgttgggccgctggccggtcatgccgaaccggggccccatgatcatattttgttcgaa
accgaggctggcctgcgcgtcacctttcgcgacccccggcgcttcggtctgatcaccctg
gccgagcccgagactctggatgatcacccgctgctggccaagcttggtcccgagccgctg
tccgaggctttcgacgccgaggtcctggtgcgccggctgaacggccgtcaggcgccgatc
aaggcggcgctgcttgatcagggcgtggtggccgggcttggcaatatctatgtcagcgag
gccttgttccgcgccggcatttcgccgctgcgcccggcggccagcgtcaccggcgcctgg
gccgaggcgctggtggcggcgattcgcgccgttttgggcgaagccatcgccgcgggcggc
tcgtcgttgcgcgaccatcgccagaccgatggggctttgggctattttcagcaccgcttc
gccgtttacgatcgcgtcggccaaccctgcccgggctgcgactgcgatgtggcgcggacc
ggcggcatcgaacggatggtccagtccgggcgatccacctttttctgcgggcgtcgtcag
cggtga

DBGET integrated database retrieval system