KEGG   Rickettsia rickettsii Hino: RPJ_03895
Entry
RPJ_03895         CDS       T01738                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rrn  Rickettsia rickettsii Hino
Pathway
rrn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rrn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RPJ_03895 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rrn03021]
    RPJ_03895 (rho)
   03019 Messenger RNA biogenesis [BR:rrn03019]
    RPJ_03895 (rho)
Transcription machinery [BR:rrn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RPJ_03895 (rho)
Messenger RNA biogenesis [BR:rrn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RPJ_03895 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 ATPase_2 AAA_25 OB_RNB Spore_III_AA NACHT AAA Mor
Other DBs
NCBI-ProteinID: AFB27674
Position
684285..685661
AA seq 458 aa
MNTTNKESTAELNNTESNNNYNNFAENGNIINLKQLKRKLPEELQAQAEELKIENINSLL
KQELVFAILKKSVEQGVLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPSKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIVLDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAIEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaacacaactaataaagaatccacagcagaacttaacaataccgaatccaataacaat
tataataattttgcagagaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagaattaaaaattgaaaatattaattcattactt
aaacaagaattagtttttgcaattttgaaaaaatccgtagagcagggagttttaatcgtg
ggagagggggtacttgaagtactacctgacggatttggttttttacgttcgccggaagta
aactacttagcaggccctgatgatatttatatttctcctagtcagattcgtcgctttggt
ctgcgtaccggtgatactgtagaaggtcagatcagagctccaaaagccggggaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacccttctaaagcttatcatcgt
gttcattttgataatttaacccccttataccctgatgaaaaattaggattagaacttgaa
aataatagtaaagatagtaaggattttagtacacgggttattgaacttgttgcccctatg
ggtaaaggacaacgtgcattaatagtagcaccgcctcgtacaggtaaaaccgtactatta
caaaatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgtta
atagacgaaagacctgaagaagtaaccgatatgcaacgttccgtacgtggggaggttgtt
agctctactttcgatgaaccggcaagtaggcacgtgcagcttgcagaaatggttatcaaa
aaagcaaagcgtttagtagaacataaaaaagatgtggtaattttagtagatgcgataaca
cgtttagctcgtgcttataatactgtagtgccgtcatcaggtaaagtattaacgggcggt
gttgatgctaatgctcttcagagacctaaaagatttttcggagcagcaagaaatattgaa
aacggcggttcgcttactataatcggtacggctttaattgaaaccggttctcgtatggat
gaggtaatttttgaggagtttaaaggtacaggtaattccgagatagttctagatcgtaag
attgccgataagcgtatttatccggctattgatataactagatcaggaactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggtccttcgtcgtattatcgat
ccaatgggtagcagtgaagcaatagaatttttactcaaaaaacttgaaaatactaaaact
aacggtgagttttttgagatgatgaagagtcctgaacgtcctaagaacggtctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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