KEGG T00542: RoseRS

Roseiflexus sp. RS-1: RoseRS_4389

Entry

RoseRS_4389 CDS T00542

Definition

ECF subfamily RNA polymerase sigma-24 factor

Orthology

K03088

RNA polymerase sigma-70 factor, ECF subfamily

Organism

rrs Roseiflexus sp. RS-1

Class

SSDB

Motif

Pfam:

Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_16 HTH_24 NTP_transf_3 HTH_23 Avirulence DUF134

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(5501599..5502204)

AA seq 201 aa
MANEELRLVESAQRGDIESFNALVRLYEGRVYNLCYRLLGDAESAADAAQDAFLSAYRHL
RAFRGGSFRSWVLRIATNVCYDALRARQRRSIVSLDAAVETSSEEAAPLQLADTAESPDE
FALRRELARAIEAGLAQLPVDQRLVVVLCDLQGLTYEEIAEVTGANVGTIKSRLSRGRAR
LRDVLRQGELLPLRFRHEGEE

NT seq 606 nt +upstreamnt +downstreamnt
gtggcaaacgaagagttgcgcctggtcgagtctgcgcagcgcggcgatatcgagagtttc
aacgcgctggtgcgattgtacgaagggcgggtctacaacctgtgctatcggttgctcggt
gatgccgagagcgctgcggatgcggcgcaggatgcgtttctgtcggcatatcgccacctg
cgcgcgttccgcggcggatcgtttcgttcgtgggtgctgcgcattgcaaccaacgtctgt
tacgatgcgttgcgcgcccgtcagcgccgctcgattgtatcgctcgatgctgcggtcgaa
acctcgtcggaagaagctgcaccgcttcaacttgccgataccgccgagtcgccggatgaa
tttgcgctgcggcgtgaactcgcgcgcgctatcgaggcgggattggcgcaactgccggtc
gatcagcgattggttgtcgttctgtgcgacctgcaagggttgacgtatgaagaaattgct
gaagtgaccggcgcgaatgtgggaacgatcaagtcgcggctcagccgcgggcgcgcccgc
ctgcgcgacgtgctgcgccagggggaacttctgccgctgcggtttcgtcatgagggggaa
gagtaa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RRS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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