KEGG T00310: Rru

Rhodospirillum rubrum ATCC 11170: Rru_A1213

Entry

Rru_A1213 CDS T00310

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

rru Rhodospirillum rubrum ATCC 11170

Pathway

rru00020	Citrate cycle (TCA cycle)
rru00310	Lysine degradation
rru00380	Tryptophan metabolism
rru01100	Metabolic pathways
rru01110	Biosynthesis of secondary metabolites
rru01120	Microbial metabolism in diverse environments

Module

rru_M00009	Citrate cycle (TCA cycle, Krebs cycle)
rru_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rru00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rru00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rru00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1431270..1434233

AA seq 987 aa
MGDDVETSFLTGANAVYIAEVYSRYLADPSSVDPSWVAFFGELRDGAEELSGDLKGPSWT
SRGNAVIGTADPDAPAAAKAGKNGKAAAAPVPAAPAAAGLSTAEVRAHTLDSVRALMMIR
AYRVRGHLVADLDPLGLNKNNEHPELDYRSYGFTDADLEREIFIDNVLGMESATLRKIVE
VVRETYCGTIGVEFMHIQDPEQKSWIQRRIEGERNHTRFTPEGKRAILERLTEAEGFEKF
LQVKYTGTKRFGLEGGETVIPAIEQILKRGSQLGLTDINLGMAHRGRLNLLTSLLHKPYR
AIFSEFQGNSANPDDVQGSGDVKYHLGTSADREFDGAVVHLSLQANPSHLEAADPVVLGK
VRAKQTQLGDTDRKAVMALLIHGDAAFAGQGLVAECFGLSQLKGYRTGGTIHIVINNQIG
FTTSPQYSRSGQYCTDIAKMVQAPIFHVNGDDPEAVVHTARIVTEFRQEFGVDVVLDMVC
YRRHGHNESDEPAFTQPLMYDSIAHRQTTRTLYAQKLVSEGLISQAEADGLADAFTARLE
TEFQAATSYKPNRADWLAGKWEGLEALNGEEEFRQDRTEVPAEVLRRVGTALSTPPENFD
TNRKILRQMKAKAEMLETGQGIDWATAEALAFGTLLLEGTRVRLSGQDSGRGTFSHRHSV
LIDQTNENRHIPLDHLDPAQARFEVIDSPLSEFSVLGFEYGYSLAEPKALVLWEAQFGDF
ANGAQVIFDQFISSAESKWLRMSGLVCLLPHGYEGQGPEHSSARPERYLQLCAEDNMQVV
NITSPANYFHALRRQVHRNFRKPLIVMAPKSLLRHKLAVSPLSDFTDHGFRRVLPETKTL
VEDDKITRVVLCSGKVYYDLYQAREDQGIDDVAIVRIEQLYPWPKDTLMKVLKRYPNADV
VWCQEEPANMGYWTFVDRRIEFFLQELEHRPGRASYAGRPAAASPATGSNRGHGREQALL
VEQALTWKRDVLPQPFRRATKLSIIGQ

NT seq 2964 nt +upstreamnt +downstreamnt
atgggtgacgacgtggaaacgtcttttctgaccggagccaacgcggtctatatcgccgaa
gtctacagccgctaccttgccgatccgtcctccgtcgatccaagctgggtcgcctttttc
ggcgaattgcgcgatggcgccgaggaactgagcggtgatctcaagggaccttcgtggacc
tcgcgggggaacgcggtgatcggcaccgccgatcccgacgcccccgccgccgccaaggcc
gggaaaaacggcaaggccgccgccgctccggtccccgccgctccggccgccgccggtctc
tccaccgccgaagtccgcgcccacaccctggattccgtgcgcgccctgatgatgatccgc
gcctatcgggtgcgcggccatctggtcgccgaccttgatccgcttggcttgaacaagaac
aacgagcatcccgagctcgactaccgcagctacggcttcaccgatgccgatctcgagcgc
gagatcttcatcgataacgtgctgggcatggaaagcgccaccctgcgcaagatcgtcgag
gtcgtccgcgaaacctattgcggcaccatcggcgtcgagttcatgcatattcaagatccc
gagcaaaaaagctggatccaacgccgcatcgagggcgagcgcaaccacacccgcttcact
cccgagggcaagagggccatcctggaacggctgaccgaggccgagggcttcgagaagttc
ctccaggtcaaatatacgggcaccaagcgcttcggcctggaaggcggcgagacggtcatt
ccggcgatcgagcagatcctcaagcgcggcagccagcttggcctgaccgacatcaatctg
ggcatggcccatcgcggccggctcaatctgctgacctcgctgctgcataagccctatcgg
gcgatcttcagcgagttccagggcaatagcgccaatcccgatgacgttcagggctcgggt
gacgtgaagtaccatctgggcacctcggccgatcgtgaattcgatggcgcggtcgtccat
ctgtcgctgcaggccaatccatcccacctggaagccgccgacccggtggtgctgggcaag
gtgcgggccaagcagacccagcttggcgatacggatcgcaaggcggtgatggcgctgctg
atccacggcgacgccgccttcgccggccaggggctggtcgccgaatgtttcggcctgtcc
cagctcaagggctatcgcaccggcggcaccattcacatcgtcatcaacaaccagatcggc
ttcaccaccagcccgcagtacagccgttcgggccagtattgtaccgatatcgccaagatg
gttcaggcgccgatcttccacgtcaatggcgacgaccccgaggcggtggtgcatacggcg
cgcatcgtcaccgaattccgccaggagttcggcgtcgatgtcgtgctcgacatggtgtgt
tatcgccgccatggccataacgaaagcgacgagccggccttcacccagcccttgatgtat
gactcgatcgcccatcgccagaccacccgcacgctttatgcgcaaaagctggtgagcgag
gggctgatctcgcaggccgaggccgatggtctggccgacgccttcaccgcccgcctggaa
accgagttccaggccgccaccagctataagcccaatcgcgccgattggctggcgggcaaa
tgggaagggctggaggcgctgaacggcgaagaggaattccgccaggaccggaccgaggtg
ccggccgaggttctgcgccgggtcggcacggcgctgtcgacgccgccggaaaacttcgac
accaaccgcaagatcctgcgccagatgaaggccaaggccgagatgctggaaaccggccag
ggcatcgactgggcgaccgccgaggccctggctttcggcaccttgctgctggaaggcacg
cgggtgcggttgtcgggccaggattcggggcgcggcaccttctcgcaccgccattcggtg
ctgatcgaccagaccaacgagaaccgccacatcccgcttgaccaccttgatcccgcccag
gcgcggttcgaggtgatcgacagcccgctgtcggaattctcggtgttggggttcgaatac
ggctattcgctggccgagcccaaggccctggtgctgtgggaggcccagttcggcgatttc
gccaatggcgcccaggtgatcttcgaccagttcatcagctcggccgaaagcaagtggctg
cgcatgtcggggctggtctgcctgctgccccatggctatgagggccagggccccgagcat
tcctcggcccggcccgagcgctatctgcagctctgcgccgaagacaacatgcaggtggtc
aacatcacctcgccggccaattatttccacgccctgcgccggcaggtccaccgcaacttc
cgcaagccgctgatcgtcatggcgcccaaatcgctgctgcgtcataagctggcggtcagc
ccgctgtcggatttcaccgatcacggcttccgccgggtgctgcccgagaccaagaccctg
gtcgaggacgacaagatcacccgggtggtgctgtgttcgggcaaggtctattacgacctg
tatcaggcccgcgaggaccagggcatcgacgatgtcgccatcgtccgcatcgagcagttg
tatccctggcccaaggacaccttgatgaaggtgctcaagcgctatcccaacgccgatgtg
gtgtggtgccaggaagagccggccaatatgggctattggaccttcgtcgaccgccgcatc
gagttcttcctgcaggaactcgagcatcgccccggccgggccagctatgccggccgtccg
gccgccgcctcgccggccaccgggtccaatcgcggccatgggcgcgagcaggccttgctg
gttgaacaggccctgacctggaagcgcgatgtcctgccccagccgttccgccgcgccacc
aagctcagcatcatcgggcagtga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RRU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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