KEGG   Rhodospirillum rubrum ATCC 11170: Rru_A2408
Entry
Rru_A2408         CDS       T00310                                 
Name
(GenBank) RecJ exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rru  Rhodospirillum rubrum ATCC 11170
Pathway
rru03410  Base excision repair
rru03430  Mismatch repair
rru03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rru_A2408
   03430 Mismatch repair
    Rru_A2408
   03440 Homologous recombination
    Rru_A2408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rru03400]
    Rru_A2408
DNA repair and recombination proteins [BR:rru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Rru_A2408
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Rru_A2408
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Rru_A2408
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Peripla_BP_6
Other DBs
NCBI-ProteinID: ABC23208
UniProt: Q2RRN7
Position
complement(2806942..2808762)
AA seq 606 aa
MTDILTPAAPPALPTRDAAFLGVERSRGGRRWVLRPGDERQALAISQRLGVPEVVGRVLT
GRGVQVEEADGFLTPTLRALLPDPGHLLDMDKAVARLSKAVRDKETIAIFGDYDVDGATS
TALMHRFFRSLGARVLIHIPDRVLEGYGPNAPALEALAAKGARVVLTVDCGISAFDALRA
AKAAGLDVVVCDHHEARTELPAAVAVVNPKRLDEASPHTHLAAVGVAFLMAVAINRDLRD
SGWFAAEQRPPPDLMALLDLVALGTVCDMVPLIGVNRALVQQGLKVIAKRTNPGIAALAE
VSGVRDRVDAFHLGFMLGPRVNAGGRVGQAGMGAALLSSEDPLECLDFARQLDAFNGARK
EIEAAVLHQAIEQVEAAPANDLPLVFASGTDWHPGVVGIVASRLKERYGLPACAVALDGG
LAKGSGRSVGGVDLGRVVIAAREAGVLEAGGGHAMAAGFSLRTDRLEEFRQFLGERLKDQ
VAALALVASLDLDGVLDVRGANAQLVRALSQAGPYGSGNPEPRFAVANARVGKVDVVGMG
HVRCFLNGPSGGSLKAMAFKAADSEIGHALLTAHGASLHVAGTLRLDSFQGRETVVLVVD
DVAPCS
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgaccgatattctgactccggcggccccgcccgcccttccgacccgcgatgccgcattt
ctcggggtcgagcgttcgcgcggcggccggcgatgggtcttgcgcccgggcgatgagcga
caggccttggcgatcagccagcgcctgggggttcccgaggttgttggtcgggttctgacc
ggtcgcggcgtccaggtcgaggaggccgacggttttctcacgccgacgttgcgcgccctg
ctgcccgatcccggccatctgctggatatggacaaggcggtggcccgcctgagcaaggcg
gtgcgcgacaaggagacgatcgccatcttcggcgattacgacgtcgacggggcgacctcg
acggccctgatgcaccgcttcttccgcagcctgggcgcccgggtgctgatccatattccc
gaccgggtgcttgagggctatggccccaatgctccggccctggaggccttggccgccaag
ggggcgcgggtggttcttacggtcgattgcggcatcagcgcctttgacgccctgcgcgcg
gccaaggcggcggggcttgatgtcgttgtttgcgaccaccacgaggcgcgcaccgaactg
cccgccgccgtcgccgtggtcaatcccaagcgccttgatgaggccagcccccatacccac
ctcgccgccgttggcgtggccttcctgatggcggtggcgatcaaccgcgatctgcgcgac
agcggctggttcgccgccgagcagcggccgccgcccgatctgatggccttgctcgatctg
gtggcgcttggcacggtttgcgacatggtgccgctgatcggcgtcaatcgcgccctggtc
caacaggggctgaaggtgatcgccaagcgcaccaatcccggcatcgccgccctggccgag
gtgtcgggcgtgcgcgaccgggtcgacgcctttcatctgggattcatgctggggccgcgg
gtcaatgccggcggccgggtggggcaggccggcatgggcgcggccctgttgtcgagcgag
gatccgctggaatgcctggatttcgcccgccagcttgacgccttcaatggcgcgcgcaag
gaaatcgaggcggcggtcctgcatcaggcgatcgaacaggtggaagccgcccctgccaat
gatctgccgctggttttcgccagcggcaccgattggcatcccggcgtcgtcggcatcgtc
gccagccggctcaaggaacgctatggcttgccggcctgcgccgtcgccctggatggcgga
ctggccaaggggtcgggccgctcggtcggcggcgtcgatcttggccgggtggtgatcgcc
gcccgcgaggccggcgtgcttgaggccgggggcgggcacgccatggccgccggtttcagc
ttgcgcaccgatcgcctggaggagtttcgccagttcctgggcgagcggctgaaggatcag
gtggcggcgctcgccctggtcgcctcgctcgatctcgatggggttctcgatgtgcgcggc
gccaatgcccaattggtgcgcgccctgtcgcaggccggcccctatggctcgggcaatccc
gaaccgcgcttcgccgtcgccaatgcccgcgtcggcaaggtcgatgtcgtcggcatgggc
catgtccgctgtttcctcaacggtccctcggggggctcgttgaaggcgatggctttcaag
gccgccgattccgaaatcggccacgccctgctcaccgcccatggcgcctcgctgcatgtg
gcgggaaccctgcgcctcgatagcttccaggggcgggagaccgtcgtcctggtggttgac
gacgtcgccccctgctcctga

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