KEGG   Rhodospirillum rubrum ATCC 11170: Rru_A3480
Entry
Rru_A3480         CDS       T00310                                 
Name
(GenBank) succinyldiaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
rru  Rhodospirillum rubrum ATCC 11170
Pathway
rru00300  Lysine biosynthesis
rru01100  Metabolic pathways
rru01120  Microbial metabolism in diverse environments
rru01230  Biosynthesis of amino acids
Module
rru_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rru00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Rru_A3480
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rru01002]
    Rru_A3480
Enzymes [BR:rru01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     Rru_A3480
Peptidases and inhibitors [BR:rru01002]
 Metallo peptidases
  Family M20
   Rru_A3480
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer
Other DBs
NCBI-ProteinID: ABC24274
UniProt: Q2RNM1
Position
4004973..4006187
AA seq 404 aa
MSALPLRWTAAELADPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEG
GERVDNLYARRGGAGPCFGFAGHTDVVPAGDGWSRPPFGAEVVDGALVGRGAADMKGGIA
CFVAAVARLISGPDSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDL
CLVGEPTNPEGLGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAE
TLDDGTAHFQPSSLQLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLA
ACDGDESGFSLVLEHSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIRSH
CPVAEFGLVGRTMHKPDERVAVADLEALSEIYRRVLVGFFEAPC
NT seq 1215 nt   +upstreamnt  +downstreamnt
ttgtctgcgcttccccttcgctggactgcggccgaattggccgatcccttggctttggcc
cgggcgctggtggcttgccccagcgtcaccccgcgtgatgccggggcccttgatgttctt
gaatccgccctgatcgccttgggcttccgctgcgttcgcctgccctttggcgccgagggc
ggcgagagggtggataatctgtatgcccgccgcggcggcgccggcccctgtttcggattc
gccggccatacggatgtcgtgcccgccggcgacggctggagccggccgccctttggcgcc
gaagtggtcgatggtgccctggtcggccggggagcggccgatatgaaaggcggcatcgcc
tgtttcgtcgccgccgtcgcccggttgatttccggacccgattccacgggatcgatttcc
agacacgatcccacgggatcgatcgccctgctgatcaccggcgacgaggagggccccgcc
cttcacggcacccgcaaggtgctggagtggatggagggggctggcgaaaggatggatctg
tgtttggttggcgagccgaccaatcccgaaggcctgggcgacatgatcaagatcggtcgg
aggggcagcctgaccgccaccgtcacccttctcggccgcgccggccatgtcgcctatccc
catctcgccgataacccccttcatcggctctcgacgttgaccggcctgctgctggccgag
accctggacgacggcacggcgcatttccagccttctagcctgcagctgaccagcatcgat
gtcggcaatccggccgccaatgtcattcccgccaaggccaccttgcgcttcaatatccgc
ttcaacgatcgccatagcggcgagtcgctgtcggcctggatccgcgcccgctgtctggcg
gcctgcgatggcgacgaaagcggcttttccctggttttggagcatagcggcgatgccttc
ctgacgccgcccggcccgctgtcggatctgatcgccacggcctgtcaggcggtcaccggc
cggcggccggagctgtcgacctcgggcggcacctccgatgcccgtttcattcgcagccat
tgcccggtggccgaattcggtctggtcgggcgaaccatgcacaagcccgatgaacgggtg
gcggtggccgatctcgaagccttaagcgagatctaccgccgggttctggtcggtttcttc
gaggccccatgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system