KEGG   Rhodococcus ruber: CS378_23405
Entry
CS378_23405       CDS       T05142                                 
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
rrz  Rhodococcus ruber
Pathway
rrz00300  Lysine biosynthesis
rrz01100  Metabolic pathways
rrz01120  Microbial metabolism in diverse environments
rrz01230  Biosynthesis of amino acids
Module
rrz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rrz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CS378_23405
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rrz01002]
    CS378_23405
Enzymes [BR:rrz01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     CS378_23405
Peptidases and inhibitors [BR:rrz01002]
 Metallo peptidases
  Family M20
   CS378_23405
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: ATQ31395
Position
5113071..5114147
AA seq 358 aa
MSAPHLDLHADPIELTAALVDIPSVSRDEAVIAESVEQALRTQTTGFEIVRSGNAVLART
RLGRPSRVLLAGHLDTVPIADNVPSRRAGELLYGCGTADMKSGDAVFLHLAATIAEPAHD
LSLVFYDCEEIAAVHNGLGRIERDLRDWLDADVAILGEPTAGQIEAGCQGTLRVRIAASG
VRAHSARSWLGDNAIHRLAPVLGRLAAYEPRSVDIDGCVYREGLSAVRIAGGVAGNVVPD
AADLDVNFRFAPDRTVEQALAHVREVFDGLDVTLELTDSSPGALPGLAHPTAADLVAAAG
GRFRAKYGWTDVARFAALGIPAVNYGPGDPNLAHTRDEHVPVGQITEVADTLRRYLAG
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtctgcaccgcacctggacctgcatgccgatccgatcgagctgaccgctgccctggtg
gacatccccagtgtctcccgggacgaggcggtgatcgccgagtccgtcgaacaggcgctg
cgcacccagaccaccggtttcgagatcgtccgcagtggtaacgcggttctcgcccgcacc
cgcctcgggcggccgagccgggtgttgctggccggtcacctcgacaccgtgcccatcgcg
gacaacgtgccgtcgcggcgcgcgggggagttgctgtacgggtgcggcacggccgacatg
aagtcgggcgacgcggtgttcctgcacctggccgccacgatcgccgagccggcgcacgat
ctgagcctggtgttctacgactgcgaggagatcgccgcggtgcacaacggtctcggccgc
atcgaacgggacctgcgcgactggctggacgcggacgtggcgatcctcggcgaaccgacg
gccggccagatcgaggcgggctgccagggcaccctgcgggtgcggatcgcggcgagcggg
gtgcgggcgcattcggcgcggtcctggctgggagacaacgcgatccaccggctggccccg
gtgctcgggcggctcgcggcctacgaaccgcgctcggtggacatcgacggctgcgtctac
cgcgagggtctgtccgcggtgcggatcgccggcggtgtcgccggcaacgtggtgcccgac
gccgcggacctcgacgtcaacttccggttcgcgcccgaccgcacggtcgagcaggcgctc
gcgcacgtgcgagaggtgttcgacggtctcgacgtcaccctcgagctcaccgacagttcg
cccggcgcgctgcccggcctggcccaccccaccgcggcggacctcgtcgccgcggccggc
ggccggttccgggccaagtacgggtggacggacgtcgcgcggttcgccgcgctggggatc
ccggcggtcaactacggtcccggcgatccgaacctcgcgcacacccgggacgagcacgtg
cccgtgggacagatcaccgaggtcgccgacacgctgcgcaggtacctcgccggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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