KEGG   Renibacterium salmoninarum: RSal33209_1774
Entry
RSal33209_1774    CDS       T00641                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rsa  Renibacterium salmoninarum
Pathway
rsa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RSal33209_1774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsa03400]
    RSal33209_1774
Enzymes [BR:rsa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RSal33209_1774
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RSal33209_1774
DNA repair and recombination proteins [BR:rsa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RSal33209_1774
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: ABY23509
UniProt: A9WMX8
Position
complement(1540483..1541409)
AA seq 308 aa
MPELPEVEVVRRGLQKLVVGRTIENVQVLDPRSIRRHLLGVEDFRAQLAGNRIGSVSRRG
KFLWLSLFYPADGHATGTALVTHLGMSGQMLMQDPEHADEKHLKVRIDFGPDDDLAKELR
FVDQRIFGGMFVSELVPTADGLPGGLGDDQPWIAAEAAHIAKDPLDPNFSLSDFANLLKG
SKIGIKRVLLDQARISGVGNIYADESLWASSLHYATPAGQLSFTQLDELIRNVRKVMEAS
LAVGGTTFDSLYVNVNGASGYFERSLNVYGRENKPCYRCQDNGLLTLIRRAPFMNRSSYL
CPVCQPKP
NT seq 927 nt   +upstreamnt  +downstreamnt
atgcctgaactgcccgaggttgaggttgttcgtcgcgggctgcagaaattggttgttggc
cgcactatcgagaacgttcaagttctcgatccgcgctcgattcgccgccatctgctaggg
gtcgaggacttccgtgcccaattggctggaaatcgcatcggttcggtttcccgacgcggg
aagttcctgtggctgtcgctcttttatccggcagacgggcacgctactgggactgcgctg
gtgacccatctgggcatgagcgggcaaatgctcatgcaagacccagagcatgccgatgaa
aaacatctcaaggtgcggatagattttggccctgatgacgatctggctaaagaactgcgt
tttgtggatcagcggatcttcggtggcatgtttgtctccgaactagtgccgacggctgac
gggttgccgggcggcttaggtgatgaccagccctggatcgccgcggaggctgcgcatatt
gcgaaggatccgcttgacccgaatttttcactttcggactttgcaaatctgctcaagggt
agcaagatcggcatcaagcgggtgctgctcgatcaggcccggatttccggggttggaaat
atctacgcggatgaatcgctctgggcaagctctttgcactatgccacgccagctgggcag
ctgagcttcacgcagcttgacgagctaatccgcaatgtacgcaaggtcatggaagcttcg
ttggccgtgggcggtacaacttttgactcgctctatgtgaacgtcaatggcgcttccggt
tacttcgaacggtcattgaatgtctatggccgggagaataagccctgctatcgctgccaa
gataatggtcttttgactttgatccggcgtgcaccgttcatgaatcgctcctcttatctg
tgcccggtgtgccagcccaaaccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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