KEGG   Rhodoferax saidenbachensis: RS694_07405
Entry
RS694_07405       CDS       T04623                                 
Name
(GenBank) DNA helicase UvrD
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
rsb  Rhodoferax saidenbachensis
Brite
KEGG Orthology (KO) [BR:rsb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsb03400]
    RS694_07405
Enzymes [BR:rsb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RS694_07405
DNA repair and recombination proteins [BR:rsb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     RS694_07405
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 ResIII
Other DBs
NCBI-ProteinID: APW42384
UniProt: A0A1P8K8Q8
Position
1544118..1547462
AA seq 1114 aa
MNAAISHGSAAFEHNGQLVARQRFYEIACDPRRSVAVEACAGAGKTWMLVSRMVRALLEG
AAPQEILAITFTKKAAGEMRQRLQEWLHSYAQADDATLREALLQRGLLTEPTAEQLQTLR
GLHAQLLNSGRPVQIRTFHSWFAALLRSAPLAVLHELGLPTQYELLENDAQAVAQVWRRF
QTRVVQDAAAKADYLDAVTAFGRHQTHKALEAALSKRTEFALADAHGVVATSVRHFAEQF
PAFKGLQAPLDRLAQPAVQQLLWDSARALGTCTGKTCLTAASTLERALTDGNVTGSMDAL
LTKSGTARKLTDKLVDLGSVQAAQALLLEVQQAQDQHQAWLHQQRMARLARGLLDDYAAL
KRERGWIDMGDLERAALALMSDTELSGWVQERLDARVRHLLIDEFQDTNPLQWQALSSWL
ASYAGAGNAPSVFIVGDPKQSIYRFRRAEPQVFRAAKAFVVDGLGGDVLSCDHTRRNAPP
IIDLVNTVMLQAQEAKEFEDFRAHSTESLEPGQVLKLPRITREAKVDVLDAEPAWRDSLS
TPRHVVEDTRKTLECRQAAHWLAQQLGQGSVKPQGIMVLARRRAHLGLMQEELAKLHIPA
QQPEKNELGECPEVQDLIALMDALVSPRHDLSLARALKSPLFGVQDSDLVALVLQQRALQ
ASAPVSDDVPTVVTWLQVLQEAAGLPPALAPIGATLTRWQQWLATLPPHDALSAIYEDGD
VLARYAVASPPVLRASVLANLRALLGAALQVDGGRYSTAYGLVRALRTGGIAAPVRDQAN
AVRLLTIHGAKGLEAPLVLVLDTDGEAPKSETMGVLVDWPGEAAHPRRFVFLASESNPPA
CVVDTLALEQAARSREELNALYVALTRTQQTLVVSSMEPHRENPGSWWQRLHAHAQDAVW
PLGRDEDSVPPGPVEKQSGHEAITLKIVPKRALAPVDIAQAATDSIAKTSGALAVAVPDS
LDSRIGQAMHRLLECVQPASVVSTAPWSAAQMARVAQTFALDESQTRQAAQMAQAILQGE
GAWVWDVGQLAWHANEVPLAQGGRLLRMDRLVQHRESGDWWVLDYKSTASPQDQPDLCGQ
LHAYRAAVALAYPGQTVRAAFLTPQGRLIELTAE
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgaatgccgcaatatcccatggcagcgcagccttcgaacacaacggccagctggtcgcg
cgccagcgtttctacgagattgcttgtgacccgcggcgcagcgtggcggtggaggcctgt
gccggtgccggcaagacctggatgctggtctcgcgtatggtgcgggcgctactcgaaggc
gctgcgccgcaggaaatcctggccatcacgttcaccaaaaaggccgctggcgaaatgcgc
cagcgcctgcaggaatggctgcacagttatgcgcaggccgatgacgcgacgctgcgtgaa
gccctgctgcaacgcggcctcctgacggaacccaccgctgaacaattgcagaccctgcgt
ggcctgcatgcgcaactgttgaacagtggccgcccggtgcagatacgcaccttccacagc
tggtttgccgccttgttgcgcagtgcgccgctggctgtattgcatgagctgggcctgccc
acgcagtacgagctgttggagaacgatgcccaggctgtggcgcaggtgtggcggcgtttc
cagacccgtgtggtgcaggacgccgccgcgaaagccgactacctggacgcggtgaccgcc
tttggtcgccaccagacgcacaaggcgctggaagcagcgttgtccaagcgcaccgaattt
gcgctggccgatgcccatggcgtggtggctacatcggtgcgtcattttgccgagcagttc
ccggcctttaagggtttgcaggcgccactggaccggctggcccaacccgcggtgcagcaa
ctcctgtgggacagcgcgcgtgcgttgggcacgtgcacgggtaagacatgcctgacagcc
gccagtacgctggagcgcgcgctgacggatggcaatgtgacggggagcatggacgccttg
ctcaccaagtcgggcaccgcacgcaagctgaccgacaagctggtggatttgggcagcgta
caagccgcgcaggcgctgctgctggaggtgcagcaggcacaggaccagcaccaggcctgg
ctgcaccagcagcgcatggcacggctcgcgcgtggcctgctggatgactacgcggccctg
aagcgcgagcgcggctggatcgacatgggcgatctggagcgcgccgcgctggcgctgatg
tcggacacggaactcagcggttgggtgcaggagcggctcgacgcgcgtgtgcgccatttg
ctgattgatgagttccaggacaccaacccgctgcagtggcaggcgctgagcagttggctt
gcgtcctacgcgggggctggcaatgcacccagcgtttttatcgtgggtgaccccaagcaa
agtatttaccgcttccgccgtgccgagccgcaggtgttccgcgccgccaaagcctttgtg
gtcgatggtttaggcggcgatgtgttgagctgcgaccatacgcgccgcaatgcgccgccc
atcatcgacctggtcaacaccgtaatgctgcaggcgcaggaggccaaagagtttgaggac
ttccgcgcccacagcactgaatctttggagccaggccaggtgctcaagctgccgcgcatc
acgcgcgaggccaaggtggatgtattggacgcggagcccgcgtggcgtgactcgctcagc
acgccgcgccatgtggtggaagacacccgtaaaacgctggagtgtcgtcaggccgcgcat
tggctggcgcagcagcttgggcagggcagtgtcaagccgcagggcatcatggtgttggcc
cgccgacgcgcgcacctaggtctgatgcaggaggaactggcgaagctgcacattcccgca
cagcagcccgagaaaaatgagctgggcgaatgccccgaagtgcaggacctgattgccttg
atggacgcactggtgtcgccgcgccacgacttgtcgctggcacgcgcgctcaagtcgcct
ctgtttggtgtgcaggacagcgacctggtggcgctggtattgcagcagcgcgccctgcag
gcttctgcgccggtatctgacgatgtgcccacagttgtgacctggctgcaggtgttgcaa
gaagctgctggtctgccacctgcattggccccgataggcgccacgctcacacgctggcaa
caatggctggccacgctgccaccgcacgatgcgctgagtgccatctatgaagacggcgac
gtgttggcccgttatgccgtcgcctctccgccggtactgcgtgccagcgtgttggccaat
ttgcgtgcattgctgggcgctgccttgcaggtggacggcgggcgctacagcaccgcgtat
ggcctggtgcgcgcgctgcgtacgggcggcattgcggcgccggtacgggaccaggccaat
gcggtgcgcctgctgaccatccacggtgccaaggggctggaggcgccgctggtgctggtg
ctcgacaccgatggcgaggcacccaagtccgaaaccatgggggtactggtggactggccg
ggcgaggccgcgcacccgcgccgttttgtgtttctggccagcgaatccaacccacccgcc
tgcgtggtcgacacgctggcgctggagcaggccgcccgcagccgcgaagaactcaacgca
ctctacgtggcgctcacgcgcacccagcagacgttggtggtctccagcatggaaccgcac
cgtgagaaccccggcagctggtggcagcgcctgcatgcccatgcgcaggatgcggtttgg
cccttggggcgtgatgaggattccgttccccccgggcctgttgagaagcagagtggccat
gaggccatcaccctgaaaatagtgccaaaacgggctctagcccctgtggatattgcgcaa
gcagctactgattcaatagcaaaaacaagcggtgctctggccgttgcagtgcccgacagc
ctggattcccggattggccaggccatgcaccgcctgctggaatgtgtgcaacccgcttcc
gtggtgagcacagcgccctggtcggccgcgcagatggcccgtgtggcgcaaacctttgcg
ctggacgaaagccagacccggcaagctgcccagatggcgcaggccattctgcaaggcgag
ggcgcctgggtgtgggatgtgggccagctcgcctggcacgccaacgaggtgccgctggcg
cagggcggacgtttgctgcgcatggaccgcctggtgcagcaccgcgaaagcggcgattgg
tgggtgctggactacaaatccaccgccagcccgcaggaccagcccgacttgtgtggtcaa
ctccacgcctaccgcgcagcggtggccctggcttatccagggcaaaccgtgcgcgccgcg
tttttgacgccgcaaggccgactgattgaattgactgctgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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