KEGG   Rhodoferax saidenbachensis: RS694_11855
Entry
RS694_11855       CDS       T04623                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
rsb  Rhodoferax saidenbachensis
Pathway
rsb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RS694_11855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsb03400]
    RS694_11855
DNA repair and recombination proteins [BR:rsb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RS694_11855
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RS694_11855
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD Kinesin AAA_30 AAA_22 AAA_25 UB2H AAA_16 Microtub_bd DUF87
Other DBs
NCBI-ProteinID: APW43152
UniProt: A0A1P8KAY7
Position
complement(2470494..2472590)
AA seq 698 aa
MSESPTTVSEPEKGQFVSFPNSPFELYQPYPPAGDQPEAIDQLVEGVVDGEVFQTLLGVT
GSGKTFTMANVIARLGRPAIVFCHNKTLAAQLYSEFREFFPNNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSAINEYIEQMRLSCTKSILERRDVVIVATVSAIYGIGQPEAYHKMIMTL
RAGDKLNQRDAIAQLVRMQYQRNDMDFSRGTFRVRGDTIDIFPAEHSEMALRLEMFDDEI
ESLQLFDPLTGRIRQKIPRFTVYPSSHYVTPRDQVLMAVETIKAELADRLKEFVAAGKLV
EAQRLEQRTRFDLEMLSEVGHCKGIENYSRHLAGSAPGDPPSTLTDYMPKDAVMFIDESH
VTIGQFGAMYLGDRSRKTTLVEYGFRLPSALDNRPLKFDEFEKRMRQAIFVSATPSTYEK
EHAGKVVEQVVRPTGLVDPEVEVRPATHQVDDVLQEIRIRVEKNERVLITTLTKRMAEQL
TDYLSDNGVKVRYLHSDIDTVERVEILRDLRLGAFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRSERSLIQTIGRAARNLNGRAILYADKVTDSMERAIGETERRRKKQIAHNLEQ
GITPTALVKKVRDLIDGVYSEKAGKEADRLERDAMARAQVEDMSEKDISREIKRLEKLMM
EHARNLEFEKAARVRDQLHILKEQAFGAPGADNVVGIG
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtctgaatcgccaaccaccgtgagtgagcccgaaaaagggcagtttgtcagtttcccg
aattctccctttgagctgtaccagccgtacccgccagcgggcgaccagccagaagcgatt
gaccaactggtggagggggtggtcgacggcgaggttttccagacactgctgggtgtgacc
ggctctggcaagaccttcacgatggcgaatgtcatcgcccggctggggcgacctgcgatt
gtgttttgccacaacaagacgctggcggcgcagctttacagcgagttccgcgagttcttc
ccgaacaacgcggtggagtatttcgtcagctactacgactactaccagcctgaggcctat
gtgccgcagcgcgatttgttcattgagaaggacagcgccatcaacgagtacatcgagcag
atgcgtctgtcgtgtaccaagagcatcctggagcgccgcgatgtggtgatcgtcgccacc
gtgtccgccatctacggtatcggccagcccgaggcgtaccacaagatgatcatgacgctg
cgcgcgggcgacaagctgaaccagcgcgatgccatagcgcaattggtgcgcatgcagtac
cagcgcaacgacatggacttcagccgcggcaccttccgcgtgcgaggcgacacgatagat
atcttcccggccgagcactctgaaatggcgctgcgtctggagatgtttgacgatgagatt
gagtccttgcaactgttcgatccgctgaccggtcgcatacgccagaagattccgcgcttt
accgtgtaccccagcagccactatgtcaccccgcgtgaccaggtgctgatggcggtggaa
accatcaaggcggagctggcagataggctgaaagagtttgtcgctgccggcaagctcgtg
gaagcgcaacggctggagcagcgcacgcgcttcgacctggagatgctcagcgaggtgggc
cactgcaagggcatcgaaaactacagccgccacctggcgggcagcgccccgggcgatccg
ccctctacgctgacggattacatgcccaaggacgcggtgatgttcattgacgagagccac
gtcaccatcggtcagttcggcgcgatgtacctgggcgaccgctcgcgcaagaccacgctg
gtggaatatggattccgcctgcccagcgcgctggacaaccggccgttgaaatttgatgag
tttgaaaaacgcatgcggcaagcgatttttgtgtcagccacgccgtccacctacgaaaaa
gaacacgccggcaaggtcgtggagcaggtggtacggcccacgggcctggtcgacccggag
gtcgaggtgcggcccgccacccaccaggtggacgatgtgctgcaggaaatccgtatccgc
gtggagaagaacgaacgcgtactgatcaccacgctgaccaagcgcatggccgagcagttg
accgattacctgagcgacaacggcgtcaaggtacgctacctgcacagtgatatagatacc
gtggagcgggtggagatattgcgtgacctgcgtctgggcgcgttcgacgtgctggtgggg
attaacctgctgcgcgaaggcctggacattcccgaggtgtccttggtcgccatcctggat
gcggacaaggagggctttctgcgctccgagcgttcgctgattcagaccataggccgcgcc
gcccgtaacctgaatggccgcgccattttgtacgccgacaaggtcaccgactccatggaa
cgggcgattggcgagaccgagcggcgccgcaaaaagcagattgcccacaatctggagcag
ggtattacgccgaccgcccttgtcaaaaaggtacgcgacctgatcgacggcgtttacagc
gaaaaggcaggcaaggaggcggatcgtctggagcgcgacgccatggcccgcgcgcaggtg
gaagacatgagcgagaaggatatatcccgtgaaatcaaacgcttagagaagctgatgatg
gaacatgcccgcaatctggagttcgaaaaggcggcgcgtgtgcgggatcaactccacatc
ctgaaggagcaagcgtttggcgcaccaggcgctgacaacgtggtcggcattggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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